Trichinella spiralis: Tsp_10608
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Entry
Tsp_10608 CDS
T01609
Name
(RefSeq) hnRNP-L/PTB/hephaestus splicing factor family protein
KO
K13218
polypyrimidine tract-binding protein 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_10608
03041 Spliceosome [BR:
tsp03041
]
Tsp_10608
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Tsp_10608
Spliceosome [BR:
tsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
Tsp_10608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
Shikimate_dh_N
Motif
Other DBs
NCBI-GeneID:
10900859
NCBI-ProteinID:
XP_003372361
LinkDB
All DBs
Position
Unknown
AA seq
174 aa
AA seq
DB search
MGVYGDVQRVKILCYNKTVALIQYTEPCQAQQAIHNLDGVCLWGKPMHVSLSKHTSVQLL
KEGQSDYGLTKDYSNSTLHRFKTPGSKNYTNIYPPSFRLHLSNIPHSVSGEFIKNIFEQA
GFEVKYFRFFATNRKMATVHLESLEQAVEALIKMHNYPLTENGNLRVAFSKPEI
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgggagtttatggtgacgtgcaaagagtgaaaatactttgctacaacaaaacagttgca
cttattcaatacaccgaaccttgtcaagctcagcaagcaatacacaatttggacggtgta
tgtttgtggggaaaaccgatgcatgtatcactttctaaacatacctctgttcaactgctg
aaagaaggccaatcggattatggtttaaccaaagattattccaattctactctgcaccga
tttaaaacacccggaagcaaaaattacacgaacatttatccaccttctttccgcttacat
ttgtccaatattccacattctgttagcggagaatttataaaaaatattttcgagcaagct
ggatttgaagtcaaatatttcagattttttgcaaccaacagaaaaatggccactgttcat
ctcgagtcattggaacaggcagtagaagcattaattaaaatgcacaactatcctctgact
gaaaatggtaatctgcgtgtggcattctcgaaaccggaaatttaa
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integrated database retrieval system
