KEGG   Trichinella spiralis: Tsp_10723
Entry
Tsp_10723         CDS       T01609                                 
Name
(RefSeq) putative HEAT repeat-containing domain protein
  KO
K03872  elongin-C
Organism
tsp  Trichinella spiralis
Pathway
tsp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Tsp_10723
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsp04121]
    Tsp_10723
   03400 DNA repair and recombination proteins [BR:tsp03400]
    Tsp_10723
Ubiquitin system [BR:tsp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     Tsp_10723
   Cul5 complex
     Tsp_10723
DNA repair and recombination proteins [BR:tsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     Tsp_10723
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 10906893
NCBI-ProteinID: XP_003373736
LinkDB
Position
Unknown
AA seq 109 aa
MAEPSVSEAVDSAEISSVDYERALHGNCEGPDSFFIKLISSDCHEFIIPRHMALVSGTIK
AMLSGPGQFAENETNYKTVYTNSSTEIPDFPIQPELALELLMAANFLDC
NT seq 330 nt   +upstreamnt  +downstreamnt
atggcagaaccaagcgtctctgaagctgttgacagtgctgaaatctcttctgtcgattat
gaacgagctttgcatggtaattgcgaaggtccagattcattctttattaaattaatatcg
tcagattgccatgaatttattattccccgtcacatggctttagtttctggaacaattaaa
gccatgttatcaggcccggggcagtttgccgaaaatgaaacaaattataaaacagtttac
actaatagcagtacagaaattcccgactttcccattcagccggaattagcacttgaactg
ctaatggccgccaactttttggactgctga

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