Trichinella spiralis: Tsp_10760
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Entry
Tsp_10760 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K03254
translation initiation factor 3 subunit A
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tsp03012
]
Tsp_10760
Translation factors [BR:
tsp03012
]
Eukaryotic type
Initiation factors
eIF-3
Tsp_10760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF3a_PCI_TPR-like
PCI
Motif
Other DBs
NCBI-GeneID:
10906940
NCBI-ProteinID:
XP_003373779
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MDHHDNVSDALRKANELISDGKKELALQTLKEFVNNAHNRVLCQGYTQLMIKILYLCTEL
RKDETARDMLLHYLQMCQQKDVPSLADVLLYYLKLADDKARITKLQLQNFGVKDFDLNEP
PERLLLAMAAEEEPLGRTGYFELTPWLRYLWESYKNCLHLLSNNQRVEVLYHTVLERAFY
YCLKYDRKSEFCELADIMMRHKELAEKYHDDEISVKLSKFETVFLYFKSHFVQLEISIEL
QLWQQACTCIANIQKLIASSGCYPKPAKFAIYMKKAAMVFWKSNNIMFHAAALLQEFSMR
KQADKAWFDKRNKMAVQLATRILLAVLSISEADCLSTSAQYFDDDLIDRSDLIKTFFKRP
GLPLKRCLIKEMIIMYLGVDLCAMPEMLEFYEKLQNVQNPLLLAQKLRPYLRMIEECGNP
DYHQYLDKLYSVICIKIVKQLSRFHKTIPMEKLYGLIPYFSEDRLERELAYASRRNIVDL
RMNYMRRKVEFGAQHSVISGKVEDEVVDNTVACLPVIQTLDLITDVHENSQRTHSPSNKV
ASDEDIVEERQKSADYMKLFRIFRAYFPEDQCAILCEKFNMVKLRKEYREIKRRIVLGAI
RDREKRAAEKMRLKREEFLKMEREGTFRAGKSVILQGLEKQSNTVGEESRQNANELKTSE
KNRDCSGDETRSRRIDNILRIALVAVERLLAIFDMRMLLTRMLEDAMKDIDQRGHLERSE
NTNISEEQQQQQQQQLNERQQCRGENDLPEISERESCKLGQEEQDKKPKVEELTKEIAVC
RLDDERCQGNCKLEQEEQDKKPKVEEELTTNIVVCSLDDERYPLCRPNVEEIKGEMTWNE
YLVLLKEDLAHSCLEAHRDPGAEIYFLIEPVIRNEKREILIFKSTLPSASTFASSFEQPP
AVHQVEVKYKSALFVEPDGRSRRHQCKFTYRNDLVRFLPPNASGNLPGKNFQTCGMEPPD
DIPITLFIGVKKTIDNGSEMYTCIVELHELVLCRKPFQQKSPKLIQIKNQPAFQFATLRC
STKSIAGLPHLSTIPENGENNDDVNDNDGSEDQP
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcatgacaacgtgtcagatgcattgcgcaaagcaaatgaattaatctcggat
ggcaagaaagagctcgctttgcaaacgttgaaagaatttgtcaataatgcgcataaccga
gtgttatgccaaggttacacacaactcatgatcaagattttatacttgtgcacagaactg
agaaaagatgaaacagcgagggatatgttacttcattatctacaaatgtgtcagcagaag
gatgttccatctctcgcggacgttcttctctattatttgaagcttgccgacgataaagca
aggataactaaacttcagttacaaaattttggtgtaaaagattttgatttaaatgaacct
cctgaacggctgttgttggcgatggcagctgaagaggagccattgggtcgaactggttat
tttgagctgactccttggcttcgatatttgtgggaatcttacaaaaattgtttgcatttg
ctgagcaacaatcaacgcgttgaagtattgtatcacacagtgctagaacgagccttttac
tattgcttaaaatatgatcgaaaatcagaattttgtgaattggcagatattatgatgcgt
cacaaagaactagctgagaaataccatgacgatgaaatatcagtgaaattatcaaaattt
gaaacagtatttttgtattttaaatcccacttcgtacaactcgagatctccattgagcta
caactatggcagcaagcttgcacttgtattgccaacattcaaaaattaattgcgtccagc
ggatgttatccgaaaccagcaaagtttgcaatttatatgaaaaaagcagcaatggttttt
tggaagtcgaacaatattatgttccatgcagcagctttgctgcaagagttttccatgcgg
aaacaagctgacaaagcgtggtttgacaagagaaacaagatggcagtgcaactggcaaca
cgaatattgttggcagtattgtctatatctgaagcagattgcttgtcaacttcggcacag
tatttcgatgatgatctaattgaccgctcagatttgattaaaactttttttaaaaggcca
ggattaccactgaaaagatgtcttatcaaagaaatgataataatgtatcttggtgtggat
ttatgtgcaatgcccgaaatgttagaattctatgaaaaactgcagaatgttcagaatcca
ctgcttcttgcccaaaaactccgaccgtatctgcgtatgattgaagagtgtggaaatcct
gactatcatcaataccttgacaaactttacagtgtaatttgcataaagattgtaaaacaa
ctgtcgcgatttcacaaaacaataccaatggaaaagttatatggtttaattccatatttc
tcagaggatcgacttgaaagagaattagcatatgccagtagaagaaatatcgttgatctc
cgcatgaattacatgagacgtaaggtagaatttggtgcacagcattctgtaatttctgga
aaagtggaagatgaagttgttgataatactgtagcatgtcttcccgttatacagactcta
gatctcattacggatgtacatgaaaattcgcaaagaacacattctccttcaaataaagta
gcttctgacgaagatattgttgaagagagacagaaatctgctgattacatgaagctgttt
cgaatattccgagcatactttcccgaagatcagtgtgcaatactatgtgaaaaattcaat
atggtcaagttgcgaaaagaatacagggagataaagagacgaattgtattgggagcaatt
cgtgatagggagaagcgtgcggctgaaaagatgcgcttgaagagggaagaattcttaaag
atggaacgtgaagggacgtttcgagcgggaaaatctgtgattttgcaaggtttggaaaaa
cagtcaaatacagtgggagaagaaagtcgtcagaatgccaatgaattgaaaactagcgaa
aagaaccgggactgttctggagatgaaacgcggtcgaggcgcatagataatatactgagg
attgctctagtagcggttgagcggcttctagctattttcgatatgcgcatgcttttgacc
aggatgttggaagacgctatgaaggatattgaccaaagaggccatttggagcgttcagaa
aatacgaatatttccgaagagcagcagcagcagcagcagcagcaattgaacgagcgtcaa
cagtgcagaggagaaaatgatttgcctgaaatatccgagagggaaagttgcaagcttgga
caagaagaacaagacaaaaagccgaaagtggaagagctgacaaaagagattgcggtttgt
aggttggatgacgaacgttgccagggaaattgcaagcttgaacaagaagaacaagacaag
aagccgaaagtggaagaggagctgacaacgaatattgtagtttgttcgttggatgatgaa
cgctatccattgtgcagaccaaatgtagaggaaataaaaggtgaaatgacgtggaatgaa
tatttggtgctgttgaaggaggatttggcgcacagttgtttggaagcgcatcgagatcca
ggtgcggaaatttatttccttattgaacctgtgattcgaaatgagaagagggaaatttta
attttcaaatcaacactgccatccgcgtcaacatttgcatcatcttttgaacaacctccg
gcagttcatcaagtagaagtgaaatataagagtgcgctttttgtagaaccagacggtcgc
tcaagaaggcatcagtgcaaatttacgtaccgcaacgatttggttcgatttcttcctcca
aatgccagtggaaatttgccgggaaaaaactttcaaacttgtggaatggaaccgccggac
gacattccaatcacactttttattggtgttaaaaagacaattgataatggctcagaaatg
tatacgtgtattgtcgagcttcacgaattggtgctatgtagaaagccttttcaacaaaaa
tcgccaaaattgatccaaattaaaaatcagcctgcttttcaatttgctactcttcgttgc
tcgactaaaagtattgcaggattacctcatttgtctacaattcctgaaaatggggaaaat
aatgatgacgtcaacgacaacgatggcagtgaggatcagccgtga
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integrated database retrieval system
