Trichinella spiralis: Tsp_10788
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Entry
Tsp_10788 CDS
T01609
Name
(RefSeq) putative PCI domain protein
KO
K03035
26S proteasome regulatory subunit N5
Organism
tsp
Trichinella spiralis
Pathway
tsp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
Tsp_10788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tsp03051
]
Tsp_10788
Proteasome [BR:
tsp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
Tsp_10788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN5_C
Motif
Other DBs
NCBI-GeneID:
10906970
NCBI-ProteinID:
XP_003373809
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MYLYFLFAYCVSLWFLFSGDRRCNIIKETMNPTEQILGEFGDGRVVKMLADLSKEVEQVK
LEAERLISDEMFAAALEKLCDMERRTRLSADMNSNATVQVNIVSVCFSEKQYDILKEQII
ALSKKRSLMKYANSKMVQACVELMPSIYVEVERARLTHMLSQMKEEDGDIEGAVKVLLEL
QHQDLKFKYYKLMILLDLYNKNYVGVSNHYYNLSETETFHDKAKIVTFLKNAVVYAILAP
YSAEQWSTISRMSEDDNFDQIPKYKELVQLFIKEEIISWKKDILGVYDKLKAWSVSSTDY
VEEYVESQEHILANLEQLQCRVGEHNMRIVSKYYSRIYLNRIAELVDWNVEKTEEFLCKL
IVNGTIPLAKICRPTGVVNFVPKKKSQEELDDWAVGTVDVMEKINKVTHLILKERMMYKN
VHSFCEEEDSDEEDWFTDTLFKRQSSEYEDDFDDTDENTEDMYVEVDETTSESLSESELK
AIESEMEKKSVEPDKTSEVEVQTYILYA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttattttttatttgcatactgtgtttcactttggttcctttttagtggtgat
cggcgctgtaatattatcaaagagacgatgaatcctactgaacaaattctgggcgaattt
ggcgatggcagagtggtgaaaatgttggccgacttgtccaaagaggtggagcaagttaaa
ttggaagcggaacgattgatttcagacgaaatgtttgccgccgcgctggaaaagttgtgt
gatatggagagacgaactcgattgtctgcggacatgaactcgaacgcgactgtccaagtg
aacattgtttcggtttgtttcagcgagaaacagtacgacatcctgaaagaacaaatcatt
gctttgagcaagaagcgatctctcatgaaatatgcgaacagcaaaatggttcaagcgtgt
gtcgagttgatgccgtcaatttacgttgaagttgaacgtgcccgtttgacgcacatgtta
tcccaaatgaaggaagaagatggcgacatcgaaggtgcagtgaaagttctgttggagttg
cagcatcaagatttgaagttcaaatattacaagttgatgatcttgttggatttgtacaac
aagaactacgtgggtgtcagcaatcattattacaatttaagtgaaactgagacatttcac
gataaagcaaaaattgtcacctttttgaaaaatgccgtcgtttatgctatactggcaccg
tacagcgcggagcagtggtcgacgatcagtcgtatgtcggaggatgataattttgaccaa
attccaaaatacaaagagttggtgcagttgtttatcaaggaagaaattatatcttggaag
aaggatattttgggcgtttacgataaattgaaagcgtggagtgtgtcttcgacagattat
gtagaagagtacgtcgaatcgcaggagcatattttggccaatttggaacagttgcaatgt
cgcgtgggagagcataatatgcgcattgtcagcaaatattattcgcgtatttacttgaat
cgtatcgctgaacttgttgattggaatgttgagaaaactgaagagttcttgtgcaagttg
attgtcaatggtacaattccgttggcgaaaatttgtcgtccgactggggtggtgaatttt
gtgccgaaaaagaaatcccaagaagagttggacgattgggccgtgggtactgtagatgtg
atggagaagatcaacaaagtgactcatttgattttgaaagagcgaatgatgtacaagaat
gtgcattcgttttgtgaagaagaggacagtgacgaggaagattggttcactgatactttg
ttcaagcgtcagagtagtgaatatgaagacgattttgacgatacggatgaaaacaccgaa
gatatgtacgtcgaagtcgatgaaacgacgtcggaaagtttgagcgaaagtgaattgaaa
gcgatcgaatccgaaatggaaaaaaaatcagtagaaccggacaaaacatccgaggtggaa
gtgcaaacttatattttgtacgcttga
DBGET
integrated database retrieval system