KEGG   Trichinella spiralis: Tsp_10788
Entry
Tsp_10788         CDS       T01609                                 
Name
(RefSeq) putative PCI domain protein
  KO
K03035  26S proteasome regulatory subunit N5
Organism
tsp  Trichinella spiralis
Pathway
tsp03050  Proteasome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    Tsp_10788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:tsp03051]
    Tsp_10788
Proteasome [BR:tsp03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     Tsp_10788
SSDB
Motif
Pfam: PSMD12-CSN4_N PCI RPN5_C
Other DBs
NCBI-GeneID: 10906970
NCBI-ProteinID: XP_003373809
LinkDB
Position
Unknown
AA seq 508 aa
MYLYFLFAYCVSLWFLFSGDRRCNIIKETMNPTEQILGEFGDGRVVKMLADLSKEVEQVK
LEAERLISDEMFAAALEKLCDMERRTRLSADMNSNATVQVNIVSVCFSEKQYDILKEQII
ALSKKRSLMKYANSKMVQACVELMPSIYVEVERARLTHMLSQMKEEDGDIEGAVKVLLEL
QHQDLKFKYYKLMILLDLYNKNYVGVSNHYYNLSETETFHDKAKIVTFLKNAVVYAILAP
YSAEQWSTISRMSEDDNFDQIPKYKELVQLFIKEEIISWKKDILGVYDKLKAWSVSSTDY
VEEYVESQEHILANLEQLQCRVGEHNMRIVSKYYSRIYLNRIAELVDWNVEKTEEFLCKL
IVNGTIPLAKICRPTGVVNFVPKKKSQEELDDWAVGTVDVMEKINKVTHLILKERMMYKN
VHSFCEEEDSDEEDWFTDTLFKRQSSEYEDDFDDTDENTEDMYVEVDETTSESLSESELK
AIESEMEKKSVEPDKTSEVEVQTYILYA
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtacctttattttttatttgcatactgtgtttcactttggttcctttttagtggtgat
cggcgctgtaatattatcaaagagacgatgaatcctactgaacaaattctgggcgaattt
ggcgatggcagagtggtgaaaatgttggccgacttgtccaaagaggtggagcaagttaaa
ttggaagcggaacgattgatttcagacgaaatgtttgccgccgcgctggaaaagttgtgt
gatatggagagacgaactcgattgtctgcggacatgaactcgaacgcgactgtccaagtg
aacattgtttcggtttgtttcagcgagaaacagtacgacatcctgaaagaacaaatcatt
gctttgagcaagaagcgatctctcatgaaatatgcgaacagcaaaatggttcaagcgtgt
gtcgagttgatgccgtcaatttacgttgaagttgaacgtgcccgtttgacgcacatgtta
tcccaaatgaaggaagaagatggcgacatcgaaggtgcagtgaaagttctgttggagttg
cagcatcaagatttgaagttcaaatattacaagttgatgatcttgttggatttgtacaac
aagaactacgtgggtgtcagcaatcattattacaatttaagtgaaactgagacatttcac
gataaagcaaaaattgtcacctttttgaaaaatgccgtcgtttatgctatactggcaccg
tacagcgcggagcagtggtcgacgatcagtcgtatgtcggaggatgataattttgaccaa
attccaaaatacaaagagttggtgcagttgtttatcaaggaagaaattatatcttggaag
aaggatattttgggcgtttacgataaattgaaagcgtggagtgtgtcttcgacagattat
gtagaagagtacgtcgaatcgcaggagcatattttggccaatttggaacagttgcaatgt
cgcgtgggagagcataatatgcgcattgtcagcaaatattattcgcgtatttacttgaat
cgtatcgctgaacttgttgattggaatgttgagaaaactgaagagttcttgtgcaagttg
attgtcaatggtacaattccgttggcgaaaatttgtcgtccgactggggtggtgaatttt
gtgccgaaaaagaaatcccaagaagagttggacgattgggccgtgggtactgtagatgtg
atggagaagatcaacaaagtgactcatttgattttgaaagagcgaatgatgtacaagaat
gtgcattcgttttgtgaagaagaggacagtgacgaggaagattggttcactgatactttg
ttcaagcgtcagagtagtgaatatgaagacgattttgacgatacggatgaaaacaccgaa
gatatgtacgtcgaagtcgatgaaacgacgtcggaaagtttgagcgaaagtgaattgaaa
gcgatcgaatccgaaatggaaaaaaaatcagtagaaccggacaaaacatccgaggtggaa
gtgcaaacttatattttgtacgcttga

DBGET integrated database retrieval system