Trichinella spiralis: Tsp_10880
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Entry
Tsp_10880 CDS
T01609
Name
(RefSeq) calcium-activated potassium channel slo-1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsp04040
]
Tsp_10880
Ion channels [BR:
tsp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
Tsp_10880
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Lig_chan
Motif
Other DBs
NCBI-GeneID:
10897248
NCBI-ProteinID:
XP_003370271
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MVQFCLIRYTVRDRVVLVFVLSIGSLIIYFYDASHPNFQVETCISWSHSPSQQIDLAFNI
FFLIYFFIRFVAATDKVWFLLEVYSFIDYFTIPPSFVAIYLERTWLGKLFHRLRFLRALR
LMTVPDILQYLNVLKTSSSIRLAQLVSIFVSVSLTGAGFIHLLENSGDPFQNFQNPQRIT
YWECVYFLVVTMGTVGYGDICCKTLLGRFFMVFFILGGLAMFASYVPEIADLIGSRQKYG
GEYKAENGKRHIVVCGYITYESVTHFLQDFLHEDRDDVDVEVVFLHRVPPDLELEGLFKR
HFTKVEFFQGTVMDSIDLSRVKVHKADACLILANKYSSDPDAEDAANIMRVISLKNYSPE
IRVIVQLMQYHNKAYLLNIPSWNWRTGDDVICLAELKLGIIAQSCLAPGFSTMMANLFAM
RSFKTSMSTPGWLNDYLRGAGMEIYTESLSHSFVGMTFPETAELMFTRLKLLLLAIEIKD
DESLECNIIINPESNVIIKVNTQGFFIAQSADEVKRKGVRHVILANRTAKVLSPNERSLQ
NSLDDRNKGNLIEGTSEIDLKSSLREAGLPLKVGLSDPDDGSGDPWQRVDEEDMKYDSTG
MFHWCKARPIEDIILDREQASVTLLHNHVVLCLFADRHSPLIGLRNFVMPLRASNYHYHE
LKQVVIVGDVEYLRREWKMIQNLPKIIILNGNPLSRADLRAVNINMCDMCVIISARIPNP
NEDPTLTDKEAILASLNIKAMNFDECSPNLTAAMSGTILVNSRSPSMMLCSNPIRSGTEI
LMLTELGRF
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggttcagttttgtctgattcgttacactgttcgtgatagggtagtgctcgtgtttgtc
ctcagcattggctcgctcattatctatttttatgatgcctcacacccaaattttcaagta
gaaacctgcatctcatggtcacacagtccgtctcagcaaattgatctcgcctttaatata
ttttttcttatatattttttcattcggtttgttgctgcaactgacaaagtttggtttttg
cttgaagtgtacagcttcattgactactttaccatacctccatcttttgtcgcaatttat
ttggagcgaacatggctaggcaagctttttcaccgtttacgatttttgcgtgcgttgaga
ctgatgactgttccggatattctgcaatatttgaacgtgttgaaaaccagcagttcaatt
cgactagctcagttggtcagcatttttgtatccgtttctcttacaggagccggtttcatt
cacctgctagaaaacagtggcgatccatttcagaattttcaaaatccacaacgcatcaca
tactgggaatgtgtatactttttagtggtcacaatgggtactgtaggctatggcgatatt
tgttgcaaaactttgcttggtcgttttttcatggtcttcttcatactcggcggccttgct
atgtttgcaagctatgtgccagaaattgcggacctgataggttctcggcaaaaatatggt
ggtgaatacaaagctgagaatgggaaaagacacattgtcgtctgtggttatattacttat
gaatcggtgacgcacttcttgcaagatttcttgcatgaagatcgcgatgatgtagacgta
gaagtggtgtttttgcatcgggtgcctcctgatttggaattggaaggattgtttaagcgt
cactttacaaaagtagaattcttccagggtacagttatggattctatagacctcagtcga
gtaaaagttcacaaggcagacgcatgcctaatcctagccaataaatattcgtcagaccca
gacgcggaagatgctgcgaacattatgcgggtgatttcactgaaaaactactctccggaa
attcgcgtcattgtacaactgatgcagtatcacaataaagcatatctgttgaacatacct
agttggaattggcgaactggggatgatgttatctgcctagctgagctgaagttgggcatt
attgctcaaagttgtctagcacccggattttccaccatgatggctaacctgtttgccatg
cgttcatttaaaacgtcaatgagcacgccaggttggttgaatgattatttgcgaggggct
ggaatggaaatttacacggaaagtctatcgcacagctttgttggtatgacgtttcctgaa
acggcagaattgatgtttactcgtttaaaactgctcctcttggcaattgaaattaaggac
gatgaaagcttagaatgcaacattattatcaatccagagtcaaacgttatcatcaaagta
aacacccaagggtttttcatcgcacaatctgcagacgaagttaaacgaaaaggggttcgg
catgtaattttggccaatcgaacagcaaaagtgttatcaccgaatgaacgatcactgcag
aattcattagatgaccgaaataaaggaaatcttattgaaggaacgtctgaaattgacctc
aaatccagtttgagagaagcagggctaccattgaaagttggcttgagtgatccggacgat
ggcagcggtgatccttggcaacgggttgacgaagaagacatgaagtacgattcaaccgga
atgtttcactggtgcaaagcacggccaattgaagatatcattttggatcgagagcaagcg
tcagtgacacttttgcataatcatgttgtgctttgcttattcgctgatcgtcacagtccg
ttgattggactgcggaattttgtaatgcctcttcgcgcgtcgaactaccattaccacgag
ttgaagcaagtggtaatagtgggcgatgtagagtatttacgtcgtgaatggaagatgatc
caaaatttgccaaaaattataattctaaacggaaacccgttgagtagagcagatttacga
gcagtaaatatcaacatgtgcgacatgtgcgtcattatctcagcaagaatacccaatcct
aatgaagatcccacgttgactgacaaagaagcaatattggcatcgttgaatattaaagcg
atgaattttgatgaatgctcacctaatttgactgcagcaatgtctgggaccattctagtg
aactctcgaagcccgtcaatgatgctttgttccaacccaattcgatctggaactgaaata
cttatgcttactgagttgggtaggttttga
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