Trichinella spiralis: Tsp_10882
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Entry
Tsp_10882 CDS
T01609
Name
(RefSeq) calcium-activated BK potassium channel alpha subunit superfamily
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsp04040
]
Tsp_10882
Ion channels [BR:
tsp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
Tsp_10882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Lig_chan
Motif
Other DBs
NCBI-GeneID:
10897250
NCBI-ProteinID:
XP_003370273
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MNVVLVFVLSIASLIIYFYDASNPHFQVETCIPLSQSPSQQIDLAFNIFFLIYFFIRFIA
ATDKVWFLLEVYSFVDYFTIPPSFVAIYLERNWLGLRFLRALRLMTLPDILQYLNIMKTS
NAIRLAQLVSIFVSVSLTAAGFIHLLENSGDPFQNFENPQRITYWECVYFLLVTMSTVGY
GDIYCKTTLARLFMVFFILGGLAMFASYVPEIADLIGARQKYGGQYKGEHGKKVPPDLEL
EGLFKRHFTKVEFFQGTVMDSVDLTRVKIDEADACLVLANKYSPDPDAEDAANIMRVISI
KNYSADIRVIVQLMQYHNKAYLLNIPSWDWRRGDDVICLAELKLGFIAQSCLAPGFSTMM
ANLFAMRSFKTSPNMPGWLNEYLRGAGMEMYTENFSPSFYGMTFPDAADILYTKLGLLLL
AIEMRDEEKRECNIAINPGSSVRIDPHTQGFFIAQSADEVKRGTFPKRDQADCDDEHFDN
EINCLGRKVSTAVVRDTDRRMSDTRSRHISDARAAINRKAYKLELGYNKYPDFDNHRSKD
MRDMYNPKGFLLAYELLSSSMPKITRKKSFGGSIAPKIDPELLKDFEQQAIKYDSTGMFH
WCPGRPIEESILERNQAKMTVLHGHVVVCLFADKDSPLIGLRNFVMPLRASNFHYHELKQ
VVIVGDVEYLRREWKTLYNLPKISILNGSPLSRADLRAVNINMCDMCVILSARIPNPTED
PTLADKEAILASLNIKAMQFEDSPLLYPLPEGISPLSTPVKMSKILVKFGTQVPMITELV
NDSNVQFLDQDDEDDPDTELYLTQPFACGTAFAISVLDSLMSTTYFNDSALTLIRTLVTG
GATPELELILAEGAGLRGGMSTPETLRNRDRCRVAQLSLADGCFQSYHVTLFQIGATYGQ
VLSQALKDYGMLCIGLYRLHDTSTDDLEKRYVITNPPPDLKLISTDKVYVLQPYDHGLEY
PAREMEE
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtgctagtatttgtcctgagtatcgcatcgttgatcatctacttttacgat
gcttccaatccgcattttcaagtcgaaacgtgtattccgttgtcgcaaagtccgtcccag
cagatcgacttggcgttcaatattttctttttgatttacttctttattcggttcatcgct
gccactgacaaagtttggtttctgttggaagtgtacagttttgttgattacttcacaatt
ccgccttcatttgttgccatctatttggaaagaaattggcttggtctccgatttctgcga
gctttgcgattgatgaccctgccggatattttgcaatatttgaatattatgaaaaccagc
aacgcgattcgacttgcccagttggtgagcatttttgtcagcgtcagtttgactgcagcc
ggatttattcacttgctggaaaacagtggtgatccttttcaaaattttgaaaatcctcaa
cgcatcacctattgggaatgtgtctatttccttctggtcaccatgagcaccgtcggatac
ggcgacatttattgtaaaacaactcttgctcgtctgttcatggtttttttcattctcggt
ggtttggcaatgtttgccagttatgttccagaaattgcggatttgatcggagccagacaa
aaatacggaggccaatacaagggtgaacacggcaagaaagttccacccgatctggagctt
gaaggtctgttcaaaaggcacttcaccaaagttgaattcttccaaggcacggtgatggat
tctgtcgatctcactcgagtgaagatagacgaagccgatgcgtgtctagtattggccaac
aaatattccccagatcctgacgcggaagatgctgccaacatcatgcgagttatatctata
aaaaattactcagccgacattcgagttattgttcaactaatgcagtatcacaacaaggca
tatctgttgaacattccaagctgggattggagacgaggagatgatgttatatgtcttgct
gaattgaagcttggtttcatcgctcagagttgtctcgctccaggattttccacaatgatg
gcaaatttatttgccatgagatcgttcaaaacttcaccaaacatgcctgggtggcttaat
gaatatttgcgtggcgctggaatggaaatgtatacggaaaatttttcacctagcttttat
ggcatgacattcccagacgcggcagacatactctacacaaaacttggtcttctcttgtta
gcaattgagatgcgtgatgaggaaaaacgtgagtgcaacattgctataaatcccggttca
agcgtacgcattgaccctcatacccaaggcttctttattgcacaatcagccgacgaagtg
aaacgtggcacttttccgaaaagagatcaagcagattgcgatgatgagcacttcgacaat
gaaatcaattgcttaggtcggaaagtttctacagcagtggttcgtgacacggatcggcgt
atgagtgatacacgtagccggcacatttcggatgccagagcagctatcaacagaaaagca
tataaacttgaattaggctacaacaaatatcctgactttgacaatcatcgttcaaaggat
atgcgtgatatgtacaatccgaaaggcttcttattagcctatgaactgctttcgtcatca
atgcccaaaatcacgcgcaaaaagtcctttggcggttcaattgctccgaaaattgatcct
gaattgcttaaagattttgaacaacaagcgatcaagtacgattctaccggaatgtttcac
tggtgccctggacgcccaattgaagaatccattcttgagcgtaaccaagcaaagatgact
gttttgcacggtcatgtggtggtttgcctttttgctgataaagacagcccgctgattggt
ttgcgtaactttgtcatgcctttgcgagcatcaaattttcattatcatgaactgaaacaa
gtggtcattgttggtgatgttgaataccttcgacgagaatggaaaacgctttacaatctg
ccgaaaatatctattcttaatggttctcctttaagtcgggctgatttgcgtgcagttaat
attaatatgtgtgacatgtgcgtcattttatcagctcgcataccgaatccgactgaagat
cctactcttgctgataaagaagcaatattagcttctttaaatattaaagctatgcaattt
gaagattcacctcttctgtatccattgcccgaaggaatttcaccgttaagcactccagta
aaaatgagtaaaatattggtcaaatttggaacacaagtcccgatgattacagaattagtg
aacgattcaaatgtgcaatttttggatcaagatgacgaagatgatccggatactgaatta
tatttgactcagccgtttgcatgcggtactgcatttgccattagtgtccttgactcactg
atgagcacgacatatttcaacgattcagcattgacgttgatcagaacgttagtaacaggc
ggtgcgacaccggagttggaattaattttagccgaaggtgctggccttcgtggaggcatg
tctactccagagacattgagaaatcgtgatcgttgtcgagtagctcagttgtctcttgcc
gacggttgcttccagtcctatcacgtaacgctatttcagattggcgctacatatggtcaa
gtgttgagccaagcgctcaaggattatggcatgctttgtataggtctttacaggctgcat
gacacatcaacggatgatttggaaaagcgctacgtcataaccaatcctcccccagatctc
aaacttatctccacagacaaagtgtatgttttgcaaccatatgatcacggattggagtat
ccagctcgagaaatggaagaataa
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