Trichinella spiralis: Tsp_10940
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Entry
Tsp_10940 CDS
T01609
Name
(RefSeq) nucleolar protein 9
KO
K06947
polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_10940
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-60S particles
Kinases
Tsp_10940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Cupin_NOL9
AAA_22
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
10903401
NCBI-ProteinID:
XP_003380963
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MDCSESQNGSLRTPHDVEVMRKNLWKKLLEIQWNSDKVFQRKFCSLLLLKTKQQLTFSGC
VEFGLLLGHCHVFGFELEASIPPKFYQVFSSYYGSPLISFNTGRRTVEQSRSNTRHFFQF
CNGNFLKPLFTKEIRKRILSAAAVLIIRCVQLPLALGTSFERLSMIKPQNCATNNNNSTI
SEKHALIPGIFLLTKEAKLLHAFSLTNEETVLFDQAASQARRFSRLERLSILFCGHIGSG
KSTRMRYFANRLLSLKVKTYLMDLDLGQSEMTLPGCISLTKLDEPLYGVNLKRMNKCEIC
YFYGEISPSNRPEIYLQLISRLYEEYVKITKYGVLLINCNGLGLDILLRIVDSLKPNEIF
FFENCNIQMDEAAASRVARVALEERREIRFVRTSHLRVLRALDKKLLRSHYICNYFAHNY
KEWVNFFNAPTSKLQWKKCFIAVAHVDVGGKFIMCWLKASGVVGLCHLNDHNAEDPCEQH
YCNDASLPAIAPPGSVPLCLGFGIISYVDTDDQTIHLRTPLSSEQLDKVNFIVCGELEIP
QQIFNCQSLLVSDDSKLTRKRNVQYMADIWRHWKMKTKHKRRYAY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggactgttcagaaagtcaaaatggaagtttacgcactccgcatgatgtagaagtaatg
cggaaaaatttgtggaaaaaattactggaaattcagtggaatagtgataaagttttccag
agaaaattttgcagtctgcttcttttgaagactaaacaacaacttacattcagtggttgt
gttgaatttgggttattgcttggtcactgtcatgttttcggttttgaattggaagcttcg
attcctccgaaattttaccaagtattttcttcttattacggaagtcctttgattagtttc
aacacaggaaggcgaacagttgagcaaagcagaagcaacacacgtcattttttccaattc
tgtaatggaaattttttgaaaccactgttcacaaaggaaattcgcaaaagaattctcagt
gcggctgcagttttgatcataagatgcgttcagttacctttagcattgggaaccagcttt
gaacggttgagcatgattaaaccgcagaattgcgcaacaaacaacaacaattcaaccatc
tctgaaaagcacgcgcttatcccgggaatttttttgctaactaaggaagctaagttgttg
cacgcgttttctcttaccaacgaagaaactgtattgttcgaccaagcagcatcacaggca
cgtcgattttcaagattagaacgtttaagcattttgttctgcgggcacattggttcaggg
aaatctacacgtatgagatactttgccaatcgtcttctttcactaaaagtgaaaacttat
ttgatggatctggatcttggtcaaagcgaaatgacacttcccggttgtatatcgttgaca
aagttggacgaaccattatacggcgtgaatttgaaacgaatgaataaatgtgaaatttgt
tatttttacggagaaatttccccatccaacagaccggaaatttacctgcagttaattagc
agactttatgaagaatacgtgaaaattacaaaatacggtgtactgttgatcaactgcaac
ggcctaggtttggacatattgttgagaattgtcgattcattgaaaccgaatgaaatattt
ttctttgaaaattgcaacattcaaatggacgaagcagccgctagccgagtggccagggtt
gctttggaggaacgaagggaaatccgttttgttcgaacatcccatttgagagtcttgcga
gcactggacaagaaactgctccgctcgcattatatttgcaattattttgcccacaattac
aaagaatgggttaatttttttaacgctccaacttcaaaacttcagtggaagaaatgcttc
attgctgttgcacatgttgatgtcggtggaaaatttataatgtgttggttgaaggcaagt
ggtgtggttggcttgtgtcatttgaacgatcataatgctgaagatccctgtgaacagcac
tactgcaatgatgcatctttacccgcaattgctccgccaggatcagttccattgtgcctt
ggatttggtataatttcttacgtcgacacggacgaccagacgatacatttgagaacaccg
ctttcatcggagcagcttgacaaagtcaatttcatcgtttgtggagaattggaaattcct
caacaaatattcaactgccaatcactgttggtcagtgatgattccaaactgacgcgtaag
cgtaacgttcagtacatggctgatatatggaggcattggaagatgaaaaccaaacacaaa
aggcgttacgcctactga
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