Trichinella spiralis: Tsp_11202
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Entry
Tsp_11202 CDS
T01609
Name
(RefSeq) putative MIF4G domain protein
KO
K03260
translation initiation factor 4G
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_11202
03012 Translation factors [BR:
tsp03012
]
Tsp_11202
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Tsp_11202
mRNA cycle factors
Stress granule specific factors
Tsp_11202
Translation factors [BR:
tsp03012
]
Eukaryotic type
Initiation factors
eIF-4
Tsp_11202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
CNOT1_CAF1_bind
BAT
Motif
Other DBs
NCBI-GeneID:
10900694
NCBI-ProteinID:
XP_003372196
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MQNLSNAVICCPGQTVVPPTHHPAPQLAVPNYPTHPAPPFIPNLGQRWSLEIPGATVQTP
FYTTQTTPGCMENAAVYPAFHGMYTPQSFVMSQVSGPYSGQPTPTAVNPFGIPTQDMPPP
PTIIRERKMLVVTNPETGEVVSLKDEAVRKETTPKVIHVTAPPELNRGVGPAPVGSSGGK
EISSPEVANEKPVVVEISPSSSDEITITVGCDNIVESTLPEEAFISKIKSTRGETVFYNT
ARAAEVINLEEKARDAAVQEENMQNSRTKSSTTDSTGVNSTVATSRPGQHVADRGETVSS
KVTKLNDFNSTMNLTPEVKQAESTPKMPTGLSTGEAVVDEEEGGNKSTAMDVVEEDTKHA
DGASSKIGPTPDSGVESGGTPQKIIRRYTKEFMLEARKLPSSRKSPMHLACGDGRLLLEL
KEQPDSHSRPNMSYSYGGGGFGRSGRSGRSGGGGGGGQPNRYIGRTSLPTNVQLQRDENP
WKPSYLTTQDDSTEEARTERLLKNGRVVLNKLTPKNFDSMHAEFKKLAEDMNTEDRMEKL
IELVFEKAISESNFCEIYSRLFHALSVICCFVFICMQCVERSEILSELEELEAQSKRRRL
GVIRLIGELYKVTLLKMTVLQNDVVKGLTSEINEENLECLCSLLTIVGAKLESEVQSDPN
ARQWLNGIFKNLKSYVENTGRPARIRFMIMDLLDLRENKYVPRHQVQKPKNLSEIEREME
EQRRQESARADELRMGGSSSLYGDGIGKERGRRTRQLQNRYNSSSSSSYQGRSPGTGKSQ
IRRSINVISNTTLRDTQSQYISSNTLPTVGSVKLRPGGNAHDRVATSSPPNAAAGGGGGN
DDNSSSNSIIQSGSELRRSLELPKSSDSWPDDGSDYKSQGPSQVKVKKLNDEEAERIACQ
ILDDFISGKEDMTAADVSALTGNDEMIIAKWLFHAFDGDRVRRYKLGHLFVFIVKSNVWT
LDTVVNGLVTFIQESFAELETDYPKITLYFGEIFAGIYYYGKDVVVAGSFFRFLEAFEMK
ALNVLIQALASLKDYSSANADMLFDLWEANGQKLIGESNSFSKTDAELLRENREFQTTDK
RSESFVGAFVDCMCSRCVEVTGNSMELKHVHSFEEMSNVLSMYVTGTSHLECFVLEKLKD
YYIECQCPKDLLTDMFTALAKSTITAESFFKFRTSCESENSLNGFVVTNASLREFYKNLE
KLKLKQTSSASRY
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacttaagcaacgcagtaatttgctgtccgggacaaactgtggtgccaccaacc
catcatccagcaccacaacttgcagttccgaattatccaacccatcccgctccgccattt
attcccaatttagggcaacgatggtcattagaaattccaggggcgaccgtacaaacacca
ttttacacaacccagaccacgcctgggtgcatggaaaacgcggcagtatatccggcattt
catgggatgtatactccgcaaagttttgtcatgtctcaagtgtcgggtccgtattcgggc
cagccgaccccgacggccgtcaatccgttcggcattccaacgcaggatatgcctccgccg
ccgacgattattcgcgaacggaaaatgctggtcgtaaccaatcccgagacgggcgaagtg
gtatcgttgaaagacgaagcagtacgaaaagagacaacaccgaaagttattcacgtcacg
gcgccgcccgaactgaacagaggagtaggaccggcgccggttggcagttcgggtggaaaa
gaaatttcgtcgccagaggttgctaatgaaaaacctgtcgtagtagaaatttctccatct
tcgagcgatgaaattaccatcaccgtcggatgtgataatattgtcgaatcgacgttaccc
gaagaagcgttcatttcgaaaatcaaatccaccagaggtgaaacggtcttttacaacacc
gctagagctgctgaagtgatcaatttggaagagaaagcacgcgacgcagctgtccaagaa
gaaaacatgcaaaatagtcgaacgaaaagctctactaccgacagcactggtgttaacagt
acggtggcaacatcgcgccctgggcaacatgttgctgatcgaggggaaacagtttcgtcg
aaagtgacaaaattaaacgacttcaattcgacgatgaaccttacaccggaagtcaaacaa
gcagaatcgacgcccaaaatgccgacgggactgtcgaccggtgaagccgtggtcgacgaa
gaggagggggggaacaagtcgaccgcgatggatgtcgttgaagaagatacgaagcacgca
gacggggcaagttcgaaaattggccccacccctgacagtggagtcgaatccggcggtacg
ccgcagaaaattattcgacgttacacgaaagagtttatgctcgaagctcgtaaattgccc
tcttctcggaaatcgccgatgcatttggcctgcggtgatggacgtctgcttctcgaattg
aaagaacagccggattcccattcacgtcccaacatgtcgtacagttatgggggcggtggc
ttcggtcgcagtggacgaagcggacggtcgggaggcggtggtggcggtggtcagccgaat
cgttacatcggtcgtacgtcgttgccgacgaatgtccaactgcaacgggacgaaaaccca
tggaagccgagctatttgaccacacaagacgattcgaccgaagaagctcgaactgagcga
ttgttgaaaaatgggcgtgtcgtgttgaacaaactgacgccgaaaaatttcgacagcatg
cacgccgaattcaaaaaattagccgaagacatgaacaccgaagatcgaatggaaaaattg
atcgagctggtgttcgaaaaggcgatcagcgagtcgaatttttgcgaaatatacagtcga
ctgttccacgcgctcagtgtgatttgttgttttgtgtttatttgcatgcagtgtgtggaa
cgttcggaaatactgtccgaattggaagaattggaagcgcaaagcaaacgacgacgtttg
ggagttatacggttgatcggtgaattgtacaaagtgaccctgttaaagatgaccgtactt
caaaatgacgtggtcaaaggattgacgtcggaaattaatgaagaaaatttggaatgcttg
tgcagcttgttgactattgtcggtgccaagctggaatcggaagtccagtcggatccgaat
gctcgtcagtggttgaatggcatttttaaaaatttgaaatcctacgtcgagaatactggt
cgaccggcccgtatacgattcatgatcatggatttgttggatttgcgagagaataaatac
gttccacgtcatcaagttcaaaagccgaagaatttgtccgaaattgaacgagaaatggaa
gaacagcgtcgtcaagaatcggccagagctgatgaactgcgcatgggcggcagtagcagc
ctttacggtgacggtatcggcaaggaacgtggtcgtagaactcgccagcttcaaaatcga
tacaacagcagcagcagcagcagctatcagggacgttctcctggtacagggaaatctcaa
attagacgtagcataaatgtaatatccaatacaacacttcgggatacacaatctcaatac
atcagcagtaacactttgccaacggttggcagtgtgaaattacgaccgggcggcaatgct
cacgatcgagttgcaacttcatctccgcctaatgctgctgctggtgggggtggtggtaat
gatgataatagcagtagcaacagtattattcaaagtggcagtgagctgcgcaggtcgctt
gagttgcccaagagcagcgacagctggccggatgatggtagcgactacaaaagccaaggt
ccttcgcaagtcaaagtgaaaaagttgaacgacgaagaagcggaacggatcgcttgtcaa
attttggacgacttcatcagtggcaaagaagatatgaccgcggccgacgtttccgcgttg
accggcaacgacgagatgatcatcgccaaatggcttttccacgcattcgacggggaccgg
gtgcgtcgttacaagctcggccatctgttcgttttcattgtcaaatccaacgtttggaca
ttggataccgttgtcaacggtttggtgacatttatccaagagtcgttcgccgaactagaa
accgattatcccaaaattaccttgtattttggtgaaatttttgccggcatttattattat
ggcaaagacgtggtcgtcgcgggcagttttttccgtttcctcgaagcgttcgaaatgaaa
gctctgaacgtcctcatccaagcacttgcatctttgaaagattacagttcagccaatgcg
gatatgttatttgatttatgggaagctaatgggcaaaaattgattggagaatcgaattca
ttttcaaaaactgatgctgaattgttgcgtgaaaatcgtgaatttcaaactacagacaaa
cgttcggaaagtttcgttggtgcctttgttgactgcatgtgctcaagatgtgttgaagtc
acaggcaattccatggaacttaagcatgttcattcatttgaagaaatgagcaacgtcttg
tctatgtatgtgacgggaacttcgcatttagaatgcttcgtgttggaaaaattgaaagac
tactacatcgagtgtcaatgtcctaaggatcttttgactgatatgtttactgctctggct
aaaagcacgataacagcggagtcgtttttcaaatttcgtaccagttgtgaaagtgaaaat
tcgttgaatggttttgtggtgaccaatgccagcttgcgagagttttataaaaatttggaa
aagctgaagctcaaacagacgagttcagcttctcgttactga
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integrated database retrieval system
