Trichinella spiralis: Tsp_11221
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Entry
Tsp_11221 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K19832
nitric oxide-associated protein 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_11221
03029 Mitochondrial biogenesis [BR:
tsp03029
]
Tsp_11221
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Other ribosome biogenesis factors
Tsp_11221
Mitochondrial biogenesis [BR:
tsp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Tsp_11221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
YqeH-like_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
10900675
NCBI-ProteinID:
XP_003372177
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MKDFVTLTRMESGEDSFLPGQKRTIYHLITRRVPHQAFSEAVLRYMNNLHLPYKKELVDF
QAGRISRCKFTSDGSLFVTANLSGQIVVYDTRTKNYTRIRREAYHDAFPGFCDMDIRLMN
FVTLQLCVAFDRSSCFCFCDKGGDCVFVGSDSGMARVLDLRMEFGEHKPGSMTMHYYGEK
KKIMSVDSRVSISTVVFYSYMNLFVLARIRHFLFFFVLDGRKICCDTGQGHEIWCLGFEI
AKAERPPINNSVMVTYAHFSPILPTDLQCYFSPASLTGQRFVYSGNVNGNYVLIDLVTGR
RLYGKRVHSSLIQDVAWNPNCNEIVTTGVFFVSFFLFIFGMVIFTDGKIMVCSRTTSGNW
RISFIEYLCMSMCVHSFDFQQVMASRCTLHGAKTVLLHNFRNFSLSKDRVLLNATSKQMY
REMQRRLREMEIDRIENATKNEHTFPLSVVAASEQLSAFAQIQVEEFTRGVNVCSAKPSS
GDLEAGSSASQLCYPMSNFENFTFTSLEEMKKQSNVNAKCDRGFHIIREEAQDEYLRGIA
DDVPADMEQFLERSRSARQIFLKHGGSDAAVEGIYFQHPHQQVGVKVGNRKVKPRRVHDV
NAENLQKPPSEQCCSGCGAPFHCIDSSLPGFLPQKIFDTLYSEQMTQLLCRRCHLLKEHN
FLINVTVSSANYEKILSHLRIYQEVLIVLIVDLLDFPCSLLKSLPDLLGSNKSMIVVANK
VDLLSSNLDQFNVEKTEKMLFEHLKDIGFCDHFNVMHTAVISAKTGWGVEKLISFIQRKW
GVKGTTLNLLKFPVLNPTARRLAIREARLRRMKRFVSQLKARQANARSAKRQYNILNGYM
DMSFKGDEENKLFDGLGSAKDDSRKKEIWNPDHPDFKNGKWCFDTPGTVNSDQIINLLTL
QELVYTIPRAVLKPRKYCIYPEMSLLVGGLARLDSLNDTPCTILAYASDYLPMFVLKTGD
VGEFYKRNVGTDVLKVPCGSSEERLAVFPPLLPKVINFAESNKNFHERMDVVLSSVGWIS
VKLFNISADQQLTFCIWTPHGKGIYIRPSFL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattttgtcaccctgacaagaatggaatctggagaagatagttttttgcccgga
caaaaacgcaccatttatcacttgattactcgtcgtgtgccgcatcaggcattctctgaa
gccgtacttcgttacatgaataatcttcatttaccatacaagaaggaattggtcgatttt
caggctggtagaattagccgttgtaaatttaccagcgatggtagcttgtttgtaacagca
aatcttagtggtcaaattgttgtctacgacacccgcacaaaaaattacactagaatacga
cgcgaagcttaccatgatgcttttcctgggttttgtgacatggatataagattaatgaat
tttgttactttgcagctttgtgtagccttcgatcgatcatcgtgtttctgcttttgtgac
aaaggtggtgattgtgtttttgttggaagtgatagcggaatggcgcgagtgcttgatttg
cgtatggaattcggcgaacacaaaccaggttcaatgactatgcattattatggcgagaag
aagaaaattatgtccgtcgattcaagggtatcaattagcactgtcgtattttattcttat
atgaatttgttcgttcttgctagaattcgtcattttttatttttctttgttttagatgga
cggaagatatgttgtgacactggccaaggacatgaaatttggtgtttgggatttgagatt
gccaaagctgagcgccctccgattaacaacagtgttatggttacgtatgcacacttttct
cctattcttccaactgatttgcaatgctatttttcgcctgcttcattgactggtcaaaga
tttgtttacagtggcaacgtaaacggcaattacgtgttaattgatctcgttacgggaaga
cgcctttacggtaaacgagttcactccagtctcatccaagatgtcgcttggaatcccaat
tgcaacgagatcgtcacaactggagtattttttgtttcattttttctgttcatatttggg
atggtaatatttaccgatggaaaaattatggtgtgctcgaggacgacttcagggaattgg
agaatttcatttattgaatatttgtgtatgagtatgtgtgttcattcttttgattttcaa
caagtgatggcatctagatgtactttacatggggcgaagacagttttgctgcataatttc
cgcaatttttcgctgtcaaaagaccgtgttttattgaatgcaacaagcaagcaaatgtac
cgagaaatgcagcgacgtctgcgggagatggaaattgatcgaatcgaaaatgccacaaaa
aatgagcacacttttccattgtctgttgttgctgcgagcgaacaattatctgcttttgct
cagattcaggtggaagagtttacgcgtggcgtgaacgtctgctctgccaagccgtcatcc
ggtgacctggaggcgggctcttctgcttcgcagttgtgttatccgatgagcaattttgaa
aattttaccttcacttctctcgaggaaatgaaaaaacagtcaaatgtgaacgcaaaatgc
gaccgtggcttccacatcattcgcgaagaagctcaagatgaatatctgagaggaatagcc
gatgacgtgcctgcggatatggagcaatttttggaacgatcgcgaagtgcgagacagatt
ttcttgaagcacggtggcagcgatgctgccgttgaagggatttactttcaacatccgcac
cagcaggtcggcgtcaaagttggtaatcggaaagtgaaaccgcgccgtgtacatgatgtg
aatgcggaaaatctgcaaaaaccacctagcgagcagtgttgcagcggttgtggtgcccct
ttccactgcatcgacagctcgttgcctggatttttgccgcaaaaaatatttgacaccttg
tactctgaacagatgactcagcttctctgtcgtcgttgtcatctgttgaaagagcacaat
ttcttgataaatgtcaccgtttcatcggcaaattatgaaaaaatcctttctcatcttcga
atttaccaagaagtgctgattgttcttattgtggatttgctggattttccatgctctttg
ttgaaatccttgcctgatttactcggctcaaacaagtccatgattgttgtggcgaataag
gtagatttattatcgagcaacttggatcagtttaatgttgaaaaaactgagaagatgctg
tttgaacatttaaaagatattggattttgtgatcactttaatgtcatgcacactgcggtt
ataagtgcaaaaactggatggggtgtggaaaagttgatttcatttatccaaagaaaatgg
ggtgtcaaagggaccacattgaatttgttgaaattccctgttttgaatccaactgcccgt
cgtctggcaatcagagaggctcgtttgcgtaggatgaagcgatttgtatctcaactgaaa
gcacgacaagcaaatgccagatcagcgaagcgacaatacaatatactgaacggatacatg
gacatgagttttaaaggtgatgaagagaacaaattatttgatggcttaggttctgcaaaa
gatgacagcagaaagaaagagatttggaatccggatcatccggattttaaaaatggaaaa
tggtgtttcgatactccaggaacggttaatagcgatcagattataaatcttctgactttg
caagagctagtttatactataccaagagcagtgctcaagccgaggaagtactgcatctat
ccggaaatgtcactgcttgtcggaggtctggccagacttgacagtttgaacgatacacca
tgcaccatcttagcctatgccagtgattatcttccaatgtttgtcttgaagaccggtgat
gttggtgaattttacaaaagaaatgttggcacggacgtcctgaaagttccttgtggttct
tccgaagaacgactggccgtgtttcctcctcttctaccaaaagtaatcaatttcgccgaa
tcaaataagaatttccacgaacgaatggacgttgtattatcgtcagttggatggatatct
gtgaaattattcaatattagtgctgatcaacaattgacgttctgtatttggacaccgcat
ggaaaaggcatttatattcggcccagttttttgtaa
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integrated database retrieval system
