Trichinella spiralis: Tsp_11375
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Entry
Tsp_11375 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
tsp
Trichinella spiralis
Pathway
tsp03082
ATP-dependent chromatin remodeling
tsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Tsp_11375
03083 Polycomb repressive complex
Tsp_11375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_11375
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
Tsp_11375
Histone modification proteins
HAT complexes
HATB complex
Tsp_11375
HDAC complexes
Sin3A-HDAC complex
Tsp_11375
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
Tsp_11375
PRC2.2
Tsp_11375
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
Tsp_11375
Heterochromatin formation proteins
Other heterochromatin formation proteins
Tsp_11375
Chromatin remodeling factors
NuRD complex
Tsp_11375
NuRF complex
Tsp_11375
NuRF complex (fruit fly)
Tsp_11375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
10901133
NCBI-ProteinID:
XP_003372631
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MAHVTHTEREERGFVSFYEAKARVWRFYASHLYDMCYVSQSSQPKISVEAVVKRCEKKTV
NCESEFYVTAKNSNVGSQLMLWKMTVPSMKMLQWDSLKSCTQSAEPRYKPKAYSVFCLAR
PTTLVGMKVLPQNRDIVVLQSTQKEIELFNCSKMRESNADLSCRRIPDCSLIGLPSAGRG
LMSFNRLRPCQLLASDVDGNICIWTIRNREEARSVVTAETTILASQTMGVRDLSWHPLHI
SLFATVGDSRKLCIWDMRSLGEHKPALVEEVHDATATCIAFNRFNEVLINTASEDKFVHG
GHMGKVTDFSWLFCDRHYPLSMCSISEDGPIHMWQLNSYAFLPARKVDRTDAVQQFKPVK
EVQSSSAASGVKRSKAAKLQRNAAASK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgtaacgcatacagaacgcgaagaacgaggatttgtttcattttatgaagct
aaagcaagagtttggcggttttacgcatcacatttgtatgatatgtgttacgtatcgcag
agttcacagccgaagatttcagtcgaagcagttgtaaaaagatgcgagaagaaaactgta
aattgtgaatctgaattctatgtgacagccaaaaattcgaatgttggaagtcagttaatg
ctttggaaaatgacagttccttcgatgaaaatgcttcagtgggattctttaaagagttgt
actcagtctgctgaaccacgttacaagccgaaagcgtattcagtgttttgcttggcacgt
cctacaacgttagttggcatgaaagtactacctcaaaatcgagacattgttgtattacag
tcaactcagaaagaaatagagttgtttaattgcagtaaaatgagagaaagcaatgcagac
ttaagctgccgtagaataccagactgtagtttgattggtcttccaagtgcaggtagagga
ttgatgtcatttaatcggctgagaccttgtcaattgttggcttctgatgtggatggaaat
atatgcatatggacaatccgcaatcgagaagaagctaggagtgtggttacagcagaaacg
actattttggcatcgcagacgatgggtgtgcgagatttaagttggcatcctttgcacatt
tctttgtttgctactgtaggagacagccgaaaactatgcatatgggatatgcgctctttg
ggtgagcataaaccagcattagttgaagaggttcatgatgcgacagcaacatgtattgct
tttaatcgtttcaatgaagttttgatcaacacggcatccgaagacaagtttgtgcatgga
ggacatatgggaaaagtaaccgatttttcttggcttttttgtgaccgtcattatccattg
agcatgtgttccattagcgaagacggacctattcatatgtggcaactgaactcatatgca
tttttacccgcacgaaaggtggatcgaactgatgctgttcagcagtttaaacctgtaaag
gaggtgcaaagcagcagcgctgcttctggcgttaagcggtcgaaagcagcgaaattgcaa
cgcaacgctgctgcatcaaaatga
DBGET
integrated database retrieval system