KEGG   Trichinella spiralis: Tsp_11375
Entry
Tsp_11375         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
tsp  Trichinella spiralis
Pathway
tsp03082  ATP-dependent chromatin remodeling
tsp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    Tsp_11375
   03083 Polycomb repressive complex
    Tsp_11375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tsp03036]
    Tsp_11375
Chromosome and associated proteins [BR:tsp03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     Tsp_11375
  Histone modification proteins
   HAT complexes
    HATB complex
     Tsp_11375
   HDAC complexes
    Sin3A-HDAC complex
     Tsp_11375
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     Tsp_11375
    PRC2.2
     Tsp_11375
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     Tsp_11375
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    Tsp_11375
  Chromatin remodeling factors
   NuRD complex
    Tsp_11375
   NuRF complex
    Tsp_11375
   NuRF complex (fruit fly)
    Tsp_11375
SSDB
Motif
Pfam: Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WDR55
Other DBs
NCBI-GeneID: 10901133
NCBI-ProteinID: XP_003372631
LinkDB
Position
Unknown
AA seq 387 aa
MAHVTHTEREERGFVSFYEAKARVWRFYASHLYDMCYVSQSSQPKISVEAVVKRCEKKTV
NCESEFYVTAKNSNVGSQLMLWKMTVPSMKMLQWDSLKSCTQSAEPRYKPKAYSVFCLAR
PTTLVGMKVLPQNRDIVVLQSTQKEIELFNCSKMRESNADLSCRRIPDCSLIGLPSAGRG
LMSFNRLRPCQLLASDVDGNICIWTIRNREEARSVVTAETTILASQTMGVRDLSWHPLHI
SLFATVGDSRKLCIWDMRSLGEHKPALVEEVHDATATCIAFNRFNEVLINTASEDKFVHG
GHMGKVTDFSWLFCDRHYPLSMCSISEDGPIHMWQLNSYAFLPARKVDRTDAVQQFKPVK
EVQSSSAASGVKRSKAAKLQRNAAASK
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggcccacgtaacgcatacagaacgcgaagaacgaggatttgtttcattttatgaagct
aaagcaagagtttggcggttttacgcatcacatttgtatgatatgtgttacgtatcgcag
agttcacagccgaagatttcagtcgaagcagttgtaaaaagatgcgagaagaaaactgta
aattgtgaatctgaattctatgtgacagccaaaaattcgaatgttggaagtcagttaatg
ctttggaaaatgacagttccttcgatgaaaatgcttcagtgggattctttaaagagttgt
actcagtctgctgaaccacgttacaagccgaaagcgtattcagtgttttgcttggcacgt
cctacaacgttagttggcatgaaagtactacctcaaaatcgagacattgttgtattacag
tcaactcagaaagaaatagagttgtttaattgcagtaaaatgagagaaagcaatgcagac
ttaagctgccgtagaataccagactgtagtttgattggtcttccaagtgcaggtagagga
ttgatgtcatttaatcggctgagaccttgtcaattgttggcttctgatgtggatggaaat
atatgcatatggacaatccgcaatcgagaagaagctaggagtgtggttacagcagaaacg
actattttggcatcgcagacgatgggtgtgcgagatttaagttggcatcctttgcacatt
tctttgtttgctactgtaggagacagccgaaaactatgcatatgggatatgcgctctttg
ggtgagcataaaccagcattagttgaagaggttcatgatgcgacagcaacatgtattgct
tttaatcgtttcaatgaagttttgatcaacacggcatccgaagacaagtttgtgcatgga
ggacatatgggaaaagtaaccgatttttcttggcttttttgtgaccgtcattatccattg
agcatgtgttccattagcgaagacggacctattcatatgtggcaactgaactcatatgca
tttttacccgcacgaaaggtggatcgaactgatgctgttcagcagtttaaacctgtaaag
gaggtgcaaagcagcagcgctgcttctggcgttaagcggtcgaaagcagcgaaattgcaa
cgcaacgctgctgcatcaaaatga

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