Trichinella spiralis: Tsp_11441
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Entry
Tsp_11441 CDS
T01609
Name
(RefSeq) putative LSM domain protein
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_11441
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
Tsp_11441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
10898699
NCBI-ProteinID:
XP_003373006
UniProt:
E5SPH4
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MMSTAEKDSLKRKTDIFLPGFVAQTALVYFSREAADQTFVQTFSCLNAWEENLISKFGKV
VQLLKAYDSSLGEKCEKVALPQRNLQILQTKKSALVVDRLDRWMRERRRVKLKIRGQTGL
RREVCGILVAYDKHWNIFVENVDEIYYRRKCVRIFVKGSKIPLDTVPNRMRYESVKKLSS
NVELVKRHLPQLIIRGSSIMMISLADEGGSKSEE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctactgctgagaaagattcgctgaagaggaaaacagacatctttttgcctgga
tttgttgctcagacagcactggtatatttttcaagagaagctgcggatcaaacgtttgtt
cagacattttcttgtttaaatgcttgggaagaaaatttgatatcaaaatttggtaaagtt
gttcaattgttaaaagcatacgactcatcattgggagagaaatgtgaaaaagtcgcttta
ccgcaacgcaatttgcaaatactgcaaactaagaaaagtgcattagttgttgatcggttg
gatcgctggatgcgggaaagacgtcgagtgaaattgaaaatccgaggacagacaggtctc
agacgcgaagtgtgcgggatattggtcgcatatgacaaacattggaatatatttgtggaa
aatgttgatgaaatttattaccgcagaaaatgtgtacgcatttttgtgaaaggttcaaaa
attccgttggacactgtgccaaatcgaatgcgctacgaaagtgtcaaaaagttaagctca
aatgtggaattggtgaagcgacacttgccgcaactgattataagaggtagcagcattatg
atgattagtttggcggacgagggtggtagcaaaagtgaagaatag
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