Trichinella spiralis: Tsp_11494
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Entry
Tsp_11494 CDS
T01609
Name
(RefSeq) deoxyribonuclease II superfamily
KO
K01158
deoxyribonuclease II [EC:
3.1.22.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Tsp_11494
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.22 Endodeoxyribonucleases producing 3'-phosphomonoesters
3.1.22.1 deoxyribonuclease II
Tsp_11494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNase_II
Motif
Other DBs
NCBI-GeneID:
10898564
NCBI-ProteinID:
XP_003373062
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MFISIIVILISLKTCIAQVATCKDDNNGNPPNVLSSKLLKSAGNPAWAPSRQNINQNAGH
SVVLTMSRVLLVRSGADEAAWFVHTVPNFLAYLNAYSWPAAETAKGHMFLCISFSSALLN
SVGKAIRYQEPYVYVNNLPAAILNQNMELSNLINGIDVRVTSFLAHERFATKSAQAVANI
QAFGKHSKSFADMYARILRNRFAASIMVWSPADARSKSICRGQHKLQKITSIQLDGVPVS
RGDDSAKWALIDGKNTVCFTTNDYTATEKRTPGAAVCLENAGVYNAFRTAALNHHFEGYA
LFAMYSAKTVPCYETGIIMFILNNFCSRFI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgttcatctcaataattgtaattttgatttcgttgaaaacttgtattgcacaggttgca
acatgcaaagacgacaataacggcaatcctccaaatgtgttaagttcgaaacttttgaaa
tcagcaggaaatccagcttgggcgccttctaggcaaaatattaatcaaaacgcaggccat
tcagtagtcctgacgatgtcaagagttcttttagtgcgcagtggagcggatgaagctgcg
tggtttgtacacacagttcctaatttcctggcatatcttaatgcttattcttggccagca
gcggaaacggcaaaagggcatatgtttttgtgtatttcatttagtagtgctcttttgaat
tctgttggtaaagcaattcgataccaagaaccatacgtgtatgtaaataatttgcctgct
gcaattttgaatcaaaatatggaactgtctaatttgataaacggtattgacgttcgagta
acatcttttctggcacatgaaagatttgcaacaaaatctgcacaagctgtggcaaatatt
caagcttttggaaaacattcaaaatcatttgcagatatgtatgcaaggattttgagaaac
agatttgccgcaagcatcatggtatggtcacctgctgatgcaagatcgaaatcaatttgt
cgtggacaacataaacttcaaaaaattacttcaatacaacttgatggtgttccagtgagc
cgtggggatgatagcgcaaagtgggcactaattgacggaaagaacactgtttgtttcaca
acaaatgattatacagctactgaaaaacggactcccggagcagctgtttgtttagaaaat
gctggtgtttataacgctttccgtacagcagcacttaatcatcattttgaaggatatgct
ttatttgcaatgtattctgccaaaacagtgccgtgttacgagactggcataataatgttc
atcctgaacaacttttgctcacgctttatttga
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