Trichinella spiralis: Tsp_11531a
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Entry
Tsp_11531a CDS
T01609
Name
(RefSeq) putative piwi domain protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tsp
Trichinella spiralis
Pathway
tsp04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
Tsp_11531a
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_11531a
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_11531a
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Tsp_11531a
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Tsp_11531a
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
Tsp_11531a
microRNA pathway
RISC loading complex
Tsp_11531a
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
10902029
NCBI-ProteinID:
XP_003373118
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
SHSCFYKRQSLINLICDILNGDEREVRFHPNQLRLNTQLQPEHLNLLIPELKGVCIHTTH
RNQDRIYRIKNILSTAVSMKFEKDGKEVSVAEYFRDVYGPLKYPNLPLVEVGSKSKPIYF
PVELCQVANCQRYNKKLKACQTTSIIRFASTDAPTRILKCMDMVKKSNFNNDPFLKSFGV
QIKAEPMIVSGRVLPPPRLEYGKGNGGRQIILTPKDGAWNSNEFKFFESASCESFGFVSF
LPPHKASMLQEFCLQIVRTCRSTGIEMPDSPKFYEQARKNDTVEMVLKRIADKCDRDGIK
CDLVFVALFSSEQYAQVKSCGDITFGLVTQCVLPKTISDVAIKKSYSTMLNIAMKINMKI
GGINTKLLEDEILDNYLYKNNALVIGVDVVHPSAVETHLPSIASVGIIHGIVVGNVDTKV
TKFHASVKLQPAKQELITGFIEQFSERLLEYLDVNGTAPKNIIVYRDGVSEGQFMQVLEE
ELSALRRACKSVATNYRPLITFIVVQKRHHARFFCCDEAAARGRGKNIPAGTVIDRVVTS
PDEYDFFLCSHHGIQGTSRPTRYHVLFDESNMDANVMQSITYYLCHLYGRCARSVSIPAP
VYFADLVCARARYHVLAALNSGLVEKCSDEDSNSSSGSSSSSSSSNKAESVKTELSNIIA
LHKRLFVSHSRDKENQYTSCNEDGSISVHYTSYDQFIIPFILNV
NT seq
2117 nt
NT seq
+upstream
nt +downstream
nt
tatcacacagttgcttttacaagcgtcagtcactgataaatttgatttgcgacatattga
atggtgatgaacgtgaagtaagatttcatccaaatcagcttagattgaatacccaacttc
aaccagaacatttgaacttgttgataccagaattaaaaggggtctgtattcatacaacac
atcgaaatcaagatcgaatttatcgtattaaaaatatactcagtacggcagtatcgatga
aattcgaaaaagacggaaaagaagtttcagttgcggaatattttcgtgatgtttatgggc
cattaaagtatccaaacttgccgttggttgaagtcggcagtaaatcaaaaccaatttatt
tcccagttgaactttgtcaagtggcaaactgtcaaagatacaacaagaaattgaaagcgt
gtcaaacgacttctataattcgatttgcttcgacagacgctcctactcgaattctaaagt
gtatggacatggtcaagaaatcaaatttcaataatgatccatttttgaaaagttttggcg
ttcaaattaaagcggaaccaatgattgttagtggacgagttttgcctccgcctaggttgg
aatatggtaaaggaaatggaggacgtcaaataattcttacaccaaaagatggagcatgga
attcgaatgaatttaaattttttgaatctgcttcttgcgaatcatttggatttgtatcgt
ttctaccaccacataaagcatcaatgttacaggaattctgtctgcaaattgtcagaacat
gtcgtagtacaggaattgaaatgccggacagcccaaaattttacgaacaagcgcgaaaaa
atgatacggtagaaatggtattaaaacgtattgctgacaaatgtgacagagatggaataa
aatgtgatttggtatttgtcgcgttattttcatctgaacaatatgctcaagtgaaatctt
gtggtgatatcacttttggattggtcactcagtgtgtattaccgaaaacaataagcgatg
tggcaataaagaagagctattcgacgatgttaaatattgcgatgaaaataaatatgaaaa
ttggtggcatcaatacaaaattactggaagatgaaattttggataattatttgtataaga
ataatgcattggtaattggtgtggatgtggttcatccatctgctgtagaaacgcatttac
catcaatagcttcggtgggtattattcatggtattgttgttggaaatgtggatacaaaag
tgacgaagtttcatgcttcggtgaaactacagccagcgaagcaagaactgatcactggat
ttatcgaacaattttctgaacgtttactggaatatcttgatgttaatggtacggctccga
aaaatattattgtttatcgagatggagtatccgaaggtcaatttatgcaggttttggaag
aagaactgtctgctcttcgtagggcttgcaaatcagttgcaacaaattaccggccgttga
ttacgtttattgtggttcaaaagcgacatcatgctcgatttttttgttgtgatgaagctg
cagcacgaggacgcgggaaaaacatccctgctggtactgttatcgatagagtagtgacat
ctcctgatgaatatgatttctttttgtgcagtcatcatggaattcaaggaactagtagac
cgacgcgatatcatgtgctgtttgatgaaagcaacatggatgcgaatgtcatgcaatcga
ttacatactatttatgccatctgtatggtagatgtgctcggtctgtcagtataccagcac
cagtgtattttgcagatttagtttgcgcccgtgctcgttatcatgttcttgcagcattaa
attctggtctagtggaaaagtgttctgatgaagacagtaatagtagtagtggtagtagta
gtagtagtagttccagcaataaagccgaatccgtgaaaacagaattgtctaatataattg
cacttcacaaaagacttttcgtttcacacagtcgtgataaagaaaatcagtatacatcat
gtaatgaggatggttcaatatctgtgcattatacttcttatgatcagttcattataccat
tcatattaaatgtataa
DBGET
integrated database retrieval system
