Trichinella spiralis: Tsp_11549
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Entry
Tsp_11549 CDS
T01609
Name
(RefSeq) putative nuclear transcription factor Y subunit alpha
KO
K08064
nuclear transcription factor Y, alpha
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_11549
Transcription factors [BR:
tsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
Tsp_11549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
10902048
NCBI-ProteinID:
XP_003373137
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MDNIDLNASVASSPPDVSVTPITTTAFTNSNCSNASVTAVPSGFKTFSVQLANGQTLQLA
AASSSIQTSSSNTLQILQIDQNTLSALTNGVSLQVPGSGNDTSNGQQAIIYSSQILNTSN
LFLFKFFTFTGFSSTETGHLSPGSQSQQLNAEVGNSEVASQSFIQVSPSGSANIAQLLQN
STGQNGSPVPQIVMINPSILNSATAIQNDAKTESDDQPFLVNSKQYERIMKRRHTRAKLE
ADGRIPRGRQKYLHESRHLHALNRIRGEGGRFNSGSKRELKSKNANSSASSAANSNSKQL
KTEGDEISEFVVRKIILYFGNIINMLIIVIFYLTDFCALMLLLLFLLNNMREDKNLHLKA
SFCFFSVLF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggataatattgatttaaatgcatcagttgcttcttcaccaccagacgtatcagtcact
cctatcacaaccactgcttttacaaattcaaattgttcaaatgcaagcgtcactgctgtt
ccttcaggctttaaaacattcagtgtgcaactagcaaatggacaaacacttcaacttgca
gcagctagctcttcgattcaaacatcttcatccaatactttgcaaatattacaaatcgac
caaaacactttatcagctttgacaaatggagtttcgcttcaagttcctggttctggcaat
gataccagtaatggccagcaggcaattatttattcatcacaaatattaaataccagtaac
ttatttttatttaaatttttcacttttacaggcttttcttcaacagaaactggacatctt
tcaccaggatcccagtcccagcaactgaacgctgaagtaggaaactctgaagtagcttct
caatcgttcatccaagtttcgccttctggttcggcaaatattgcccagttacttcaaaat
tctacgggtcaaaatggttctccagttcctcagattgtgatgatcaaccccagcatattg
aactcagctaccgctattcaaaatgatgcaaaaacagaaagtgacgatcaaccatttttg
gttaacagtaaacagtacgagcgtatcatgaagagacgacatactcgtgctaagctggaa
gctgatggtcggattccaagagggcgtcagaagtatcttcatgagtcgcgccatttgcat
gcattaaacagaatacgaggcgaaggtggacgcttcaattctggttcaaagagagaactg
aaaagtaaaaatgctaatagcagtgctagttctgctgcaaatagtaattcgaagcaatta
aaaacagaaggcgacgagataagcgaatttgtagttagaaaaattattttgtattttgga
aatataattaatatgcttatcattgtaattttctaccttactgacttttgtgctcttatg
ttattattgttatttcttttgaataacatgagggaagacaaaaatttgcatttgaaagct
tcattttgttttttttcggtattattttag
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