Trichinella spiralis: Tsp_11624
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Entry
Tsp_11624 CDS
T01609
Name
(RefSeq) zinc finger protein
KO
K19871
sal-like protein
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_11624
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_11624
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Tsp_11624
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Tsp_11624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_15
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
10913002
NCBI-ProteinID:
XP_003371537
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MGVHRTKPAYRVCHQCPECDKKFANAAVLQQHMRSHVNSNNAAGRFESFDSKLSMFNYDG
RFFPMPFQNLPNPENNPTVPVTLASTTMPVNSNLESSSSSSSSNKNNTNNVGGGGGAGGS
SSSSGSSNNNNNNSSDINNNIAKITTTTNATVNNGTVATSTAFGTANTTSTLSMKFEEEN
ANPTTVENIAKSNATEINATAAAISSNLAFGPTADSTRQPTGIVPSSTTSDSSSVPQGSP
NAFSPLAVFNMRSKFFPTTFIGIQSQTPPIAAAPQFSGRPSTTCNICFKSFACQSALEIH
YRSHTKERPFKCQICSRGFSTKGNMKQHLMTHKMRPLSTTSSLDTTSTSSLNGEECAQQQ
QQQQQQQQQQQQQQLKQLADSNVEGFLNFEMADLVKSPTVMMETQPLETDEMMLNADEKQ
QVNGEMNAPTPLESIQRMWSQAETLAASNTTTPSAVAQSKKQTVFSKHQCQLCCKHFSSA
SALQIHMRIHTGDRPFKCNICERSFTTKVHMGTHMWNTNNQRGRRLFDGSLTQLPDATSP
PMVQNHTGVSGICQSFGGNSDKDEGILAASAGETLLCDEISQQLLQQHHDNERMATDEQQ
YPVVMQSSSSSQLLNMAAKLELNPMAIGGSQETYQGGGAGAGAGVSVSFPTFVTNSYFTS
SSVAAAAAANSAPKTNAAVTASIVAVTTTTANAVTATATTTTTTTSAAASVTTTVATVPS
ITVPNEYICAGTGGGLACSSVFVPGNAASVGSSGSITNGHITSASDRLPFMLGNNNNNNS
SWPSKCSVCLQMCSSNVELDAHMRFHIMHPDATGLVAGGGGGGGPRATAAVAEEEIHKRR
AN
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcacagaaccaaaccagcgtatcgtgtgtgtcatcagtgtcctgagtgtgat
aaaaaatttgcaaacgcagccgtgcttcagcagcacatgcgaagtcatgttaatagtaat
aatgctgccggtagatttgaatcgttcgactcgaaattgtcgatgttcaattacgatgga
cgtttttttcccatgccctttcaaaatttgccaaatccggaaaataatccaaccgtaccg
gtaacacttgcaagtacaaccatgccggtgaatagcaatttggaaagcagcagcagcagc
agcagcagcaacaaaaacaacaccaacaacgttggtggtggtggtggtgctggtggtagc
agtagtagcagtggcagtagcaacaacaacaacaacaacagcagtgatatcaataacaac
attgcaaaaatcaccactaccacaaatgctactgtgaacaatggtaccgttgcaacaagc
accgcatttggcacggctaacaccaccagcacattgagtatgaaattcgaagaggaaaat
gctaatccgacgacagtggaaaatattgcaaaaagcaatgcgacagaaataaatgcaaca
gcggctgcgatttcgtcgaatttggcctttggaccaactgcagattcgactcgtcaaccg
actggtattgtaccttcttctacaacgtcggattcgtcgtcggttcctcaaggctctccg
aatgcattttccccgttggccgtctttaacatgaggtcgaagtttttcccaacaactttc
atcggaattcaatcacaaacaccaccaattgctgctgcaccacaattttctggcaggccc
agcacaacttgcaatatatgcttcaaaagtttcgcttgtcaaagcgctttggaaatccac
tatcgaagtcatacgaaagaacggccatttaagtgtcagatttgtagtcgtggattctct
accaaaggtaatatgaagcagcatcttatgacgcataaaatgcgtccattgagtaccacc
agctcattggatacaacttcgacatcgtcattaaacggtgaagaatgtgctcaacaacaa
caacaacaacaacaacaacaacaacagcaacagcaacagcaacttaaacaattagccgat
agtaatgttgaaggttttctgaatttcgaaatggctgatttggtcaaatctccaactgtg
atgatggaaacgcagccattggaaacggacgaaatgatgctgaatgctgatgagaagcag
caagtaaacggagaaatgaacgcaccaacaccgttggaatcgattcagcgcatgtggtct
caagccgaaacgttggccgccagcaatacaacgacaccatccgctgttgcccagtcgaaa
aagcaaactgtatttagcaaacatcagtgtcagctgtgttgcaagcactttagcagtgct
agtgctttgcaaatccacatgcgtatccacactggtgaccgaccgttcaaatgcaatatt
tgcgaacgatccttcactaccaaagtgcacatgggtacacatatgtggaatacgaacaat
caacgaggtcgacgtcttttcgacgggtctctcacgcagttgcctgacgcgaccagtcca
cctatggtgcaaaatcacaccggtgtcagtggaatttgccagtcatttggtggaaattcg
gataaagatgagggaattttagctgcttcagcaggtgaaacattactgtgcgatgaaatt
tcacaacaactcttgcaacagcaccacgacaacgaaagaatggccactgatgaacaacaa
tatccggtagtgatgcagtcgtcatcatcgtctcagctgttgaatatggcagcaaaatta
gaattgaaccccatggcaattggtggttctcaggaaacgtaccaaggaggaggagcagga
gcaggagcaggagtgtccgtttcctttccaacttttgtcaccaattcctatttcacctcc
tcatctgttgctgctgctgctgctgctaattcagcaccaaaaacaaatgctgcagttaca
gctagtatcgtagctgttactactaccactgctaatgctgttactgctactgctactaca
actacaactacaacttctgctgctgcttctgtaacaactacagttgctactgtaccatcg
attactgttccaaatgaatacatctgtgctggtaccggtggtggattggcctgttcgtct
gtttttgtgcctggtaatgcagcttctgttggaagcagcggttcgataacgaatggtcat
attacttctgcaagtgatcgtttgccgttcatgcttggcaacaacaacaacaacaactca
tcctggccgtctaaatgttcagtatgcctgcaaatgtgctcatcgaatgtcgaattggat
gcccatatgcggtttcacatcatgcatccagatgcaacaggtctagtagcaggaggaggt
ggtggtggtggaccaagagcgacagcagcagtggcagaagaagaaatacacaaaagacgg
gcaaattga
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integrated database retrieval system
