KEGG   Trichinella spiralis: Tsp_11739
Entry
Tsp_11739         CDS       T01609                                 
Name
(RefSeq) putative LSM domain protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
tsp  Trichinella spiralis
Pathway
tsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Tsp_11739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_11739
   03041 Spliceosome [BR:tsp03041]
    Tsp_11739
   03032 DNA replication proteins [BR:tsp03032]
    Tsp_11739
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     Tsp_11739
Spliceosome [BR:tsp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    Tsp_11739
  U2 snRNP components
    Tsp_11739
 Complex B
  U1 snRNP components
    Tsp_11739
  U4/U6.U5 tri-snRNP components
    Tsp_11739
 Complex C
  U2 snRNP components
    Tsp_11739
DNA replication proteins [BR:tsp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     Tsp_11739
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 10902205
NCBI-ProteinID: XP_003372752
LinkDB
Position
Unknown
AA seq 133 aa
MSLGVPLKILHEAEGHIVMLETTTGEVFRGKLLEAEDNMNCNMTDVTVTYRDGQVTQMDQ
VYIRGSKIRFLILPDMLKNAPMFKTMLKGVPKVPAPPRGKAAAFKSKMFCHFEGGRGRGV
FSSRGFRGSSAAR
NT seq 402 nt   +upstreamnt  +downstreamnt
atgtctcttggcgttcctttgaaaattttacatgaagcagaagggcatattgttatgttg
gaaaccaccactggcgaagtatttcgtggaaaactactggaagcagaggacaatatgaat
tgcaatatgactgatgtgacagttacttatcgtgatggccaggtaacacaaatggatcaa
gtttacataagaggatcgaagattcgttttttaattctgccggatatgctgaagaacgcg
cctatgtttaaaactatgttgaaaggagtgccaaaagttcctgctccaccacgaggaaaa
gcggccgctttcaaaagcaaaatgttttgtcactttgaaggaggaagaggccgtggggta
ttttctagccgaggtttccgtggcagttcagcggcgcgttga

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