Trichinella spiralis: Tsp_11834
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Entry
Tsp_11834 CDS
T01609
Name
(RefSeq) putative neurotransmitter-gated ion-channel ligand binding domain protein
KO
K05273
glutamate receptor, anionic
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsp04040
]
Tsp_11834
Ion channels [BR:
tsp04040
]
Ligand-gated channels
Anionic glutamate
Tsp_11834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
UPF0640
Motif
Other DBs
NCBI-GeneID:
10903072
NCBI-ProteinID:
XP_003371409
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MYHVLTTNLTTWQGRDIKGMDFQNRTKRSRRGKIGERREEEATKEKLSEQDIIQKVMDGY
DWRVRPRGLNASIPVRKQCEVLLLDTGGPVIVNVNIMMRSISKVDDVNMEYSVQFTFREQ
WVDSRLAYKNMVSSGVAMPKFVVLTPNDQSQQVWMPDTFFQNEKEARRHMIDKPNVMIRI
YPDGEMLYSVRLSLVLSCPMSLEYYPLDRQTCLIDLASYGYTTEDIKYEWKEDGPVQLKD
GLKNSLPSFELQDVTTGFCTSKTNTGAREFSYYLLQLYIPSFMLVIVSWVSFWLEKESVA
ARVTLGITTLLTITTQASGINANLPPVSYTKAIDVWIEVCVAFIFCALLEFALVNYAARK
DNIEAMNRAAYSSSKMVQFGYKNFAIAPFKEMDESYIQDDIYQFDVLQRAFRLSHITADS
PYYISSPTNSKIWNGLCRWLNNYRERARRIDIVARIIFPIGFFTFNFVYWCEYSCLRTIL
TLKREYSYYLITLYIPSFMLVVVSWVNFWIDKDAVPARVSLGVTTLLTMTTQASGVNAKL
PPVSYTKAIDVWIGVCLAFIFGALLEFALVNYAGRVEFLEKERRKQKVNLLTDNRWLPTV
ALPFMMQQSSSAANPAGTFMQTRQSTQFPQMQRQMPAADGFSIEAMCPECKAEQSEKKKV
HDWEKEWIILAAFMVRKVQGTVKEDRCYFKTCIPYRLLFFQLYILDCIFSLISFIDNGMS
ILDTISSLLYTV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatgtgttaactacgaacttaactacttggcaaggtcgtgatattaaaggaatg
gatttccagaatcgtacaaaacgctcaagaagaggaaagattggtgaacgacgtgaagaa
gaagcaaccaaagaaaagctttctgaacaagacattatacaaaaagtaatggatggctat
gactggagagttcgtccaagaggattaaatgccagcataccagtacgtaagcagtgtgaa
gttttattattagacactggtggtccagtaattgtgaacgtcaacataatgatgagaagc
attagcaaggtcgatgatgtgaacatggaatacagcgtgcagtttacgtttcgagagcaa
tgggtagattcaagacttgcctataaaaatatggtatccagtggtgtagctatgccgaag
tttgtcgttcttacaccaaatgaccaaagtcaacaagtgtggatgccagatacatttttt
caaaatgaaaaagaggctagacgacatatgatagacaagcccaacgttatgattcgtatt
tatcctgatggtgaaatgttgtatagcgttagactttctttggttttgtcttgtccaatg
agcttggaatattatccattagaccggcagacatgcctcattgatctcgcaagctacggc
tatacaacagaagacattaaatacgagtggaaagaagatggcccggtgcaattaaaagat
ggtcttaaaaatagtttgccaagttttgaacttcaagatgtaactactggattctgcaca
agcaaaacgaatacaggtgcacgcgagttcagttattatttacttcaattgtacattcca
agctttatgcttgttatcgtcagttgggtttcattctggttagagaaggaatctgtggct
gcccgtgtaactctcggaattactacactgttgacaatcaccacacaagcttcaggcatc
aatgctaacctcccacctgtatcttataccaaggcaatcgacgtgtggattgaagtctgc
gtagcattcatattttgcgctttgctagagtttgcattggtaaattatgccgcaagaaag
gataatattgaggcaatgaaccgcgctgcgtattcttcttccaaaatggtgcaatttgga
tataaaaattttgcgattgccccttttaaagaaatggatgaatcctatattcaggatgat
atttaccagtttgacgtgcttcaacgcgctttccgtctgtctcatataacagctgattcg
ccatattatatttcaagtcccacaaattctaaaatttggaatggattgtgtcgttggttg
aataattacagggaaagggcaagacgaattgacattgttgctcggattattttcccaatt
ggattctttactttcaattttgtctactggtgcgaatatagctgtctcagaacaatatta
acgttaaaaagagaatacagttattacttaattactctttacataccaagcttcatgctt
gttgttgtatcttgggtaaacttttggattgacaaagatgctgttccagctcgcgttagt
cttggagtgacaacactgctaacaatgactacccaagcatctggtgttaatgctaaatta
cctccagtttcatatacaaaagcaattgacgtttggataggcgtttgtcttgcttttata
tttggtgctctactggaatttgcactcgtcaactacgctggtcgagtagaatttttggag
aaggaacgacgaaagcaaaaagtcaatcttctaactgataacagatggttacctacagta
gcgcttccgttcatgatgcaacagtcttcctctgcagctaatcctgctggaacgtttatg
caaacgcgtcagagtactcaatttccacaaatgcagagacagatgcctgctgctgacgga
ttttcaattgaagcaatgtgtccagaatgcaaagctgagcaatcagaaaaaaagaaagta
catgattgggagaaggagtggattatcttggctgcatttatggttcgcaaagtacaagga
acggtcaaagaggatagatgttatttcaagacttgtattccctataggcttctttttttt
caattgtatatattggattgcatatttagtttgatttcattcattgataatggcatgtct
attcttgatacaatttcaagtctattgtacacagtatag
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