Trichinella spiralis: Tsp_11859
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Entry
Tsp_11859 CDS
T01609
Name
(RefSeq) putative fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
tsp
Trichinella spiralis
Pathway
tsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
Tsp_11859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_11859
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
Tsp_11859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_HD2
FANCI_S2
FANCI_S1
FANCI_HD1
Motif
Other DBs
NCBI-GeneID:
10898684
NCBI-ProteinID:
XP_003372967
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MSEEKFQLLKQPWLLNSVNISHLMPVMLEEEIAKAVELTMVERPECLSRNTVVSYVSELN
CLGDSEKFRALILWLVKRMKDGQLPDVALSSIYIVLLNELSNLEICYVVAMTSRHMEHFQ
RGNFVENKWAFLLPKFFSIIAAATEIDAGDGSRLPGKELKTRLLQQFVNLNLPTSRRLLL
LTVLKEVEMTPSEKVHIFKPFFDHLNELNLDEIECYVNGLLHLLVMESKNVYFGQLMEFL
CSFPNRAKYLSQGTESVQKVQSNVILNITHAVRQYQSFGKHVINTLKCLELLKMGIFDFL
KKKHATFTSAWLRSVIPENDKLKKVMDSLISSDLNDREYVVHGLSELGFLLLDSVNLKES
GTLEKSTKNVLQNEQIALAKHLIIGNFKRHNFIRRAIIEKIIDAVMLQSSSCLYLLVLPV
LSTESGLRYMKSLIPIIELKPAMRNSLFIALRNAIFSKDLLARKTAVNGFLLFLNQKDLI
NAFSSSQMSNSSQPFPTYSSQTLPTSSCAASGRISVATIFLEMISCLRRALSLQSELRRM
LYIGLCKVAGNQKVLQEPVLDMLQKQFENYLSDPSKSGPPLCLEFCISSSKNGVTLVEPL
GVLIASINLCLGAVQADDTGNDSEISSQYHLDFEMIDSMKKRMNTICQYMMSADLEDFNL
FRRFCNLHTEIVRFAL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaaagtttcaattgctgaaacaaccatggttacttaactctgtcaacatt
tctcacctgatgcctgtcatgttagaggaagaaattgctaaagctgttgaattaacaatg
gttgaaaggcctgaatgtttaagtcgaaatacagtcgtttcttatgtttcagaattgaat
tgtttgggtgattctgaaaagtttagggcattaattttatggttagtaaaacggatgaaa
gatggtcaactccccgatgtcgcattgagttcaatatacatagttcttttaaatgaactg
tccaatcttgaaatatgttatgttgttgctatgacttcacgtcacatggagcattttcaa
cggggaaattttgttgaaaacaagtgggcttttcttttgcctaagtttttcagtattata
gcagcagctacggaaattgatgcaggtgatggaagcaggcttcctggaaaagaactgaaa
actcgactgcttcagcaatttgttaatttgaatttgcccacatcgaggcgattgctttta
ctaactgttttaaaagaagttgaaatgacaccgtccgagaaagttcacatatttaaacct
ttctttgatcatctgaatgaattaaatttggatgaaattgaatgctatgtcaacggtttg
ctccatcttttagttatggaatcgaaaaatgtctattttggacagttaatggaatttttg
tgctcatttccaaacagagcaaaatatctttcacaaggaacggaatctgtgcaaaaagtt
cagagtaatgttattttgaacattactcatgctgttaggcagtatcaaagttttggaaag
cacgttataaatactcttaaatgcttggaactattgaaaatgggaatttttgattttttg
aaaaagaagcatgcaacttttacatcggcttggctgcgatcagtaatacctgaaaatgat
aagctgaaaaaagttatggacagtttaatttcttctgacttgaacgatcgtgaatatgtt
gttcacggcttatccgagttggggtttctacttttggattcagtgaatttgaaagaaagc
ggcactttggaaaaatcgacaaagaatgttcttcagaatgaacaaattgcattagcaaag
cacttgattattggaaattttaagagacacaactttattcgtcgcgcaatcatagaaaaa
attattgacgcagttatgctacagagttcgtcttgtttgtatcttttagtgctaccggtg
ctttccacagaaagcggcttgcgctacatgaaatcgttgattccaattattgaactgaaa
ccagcaatgcgcaattctttatttattgctctcagaaatgcgatcttttcaaaggatttg
ttggcgagaaagactgctgtcaatggtttcttattatttttaaatcaaaaagatttaatc
aacgctttcagctctagccagatgtcgaattcttctcaaccttttccaacatattcaagt
cagaccctgccgacttcttcatgtgcagcaagtggtcgaatcagtgtagctacgatattt
ctggaaatgatcagctgtttacgacgagcattgtctttgcaaagcgaactacgacgcatg
ctgtacattggtttatgtaaagtggcgggaaatcaaaaagtgcttcaagagcctgttttg
gatatgctgcaaaagcaatttgaaaattacctctctgatccttccaaaagtggtcctcct
ttgtgtttggaattttgcatcagctcttcgaaaaatggagtcactttggtagaaccgttg
ggtgtgctgatagcttccatcaatttgtgtttgggcgcagtgcaagccgacgacactggc
aatgattcagaaatttcatcgcaatatcatttagattttgagatgattgattcgatgaaa
aagcgcatgaatacaatttgccaatatatgatgtctgcagatttggaagattttaatctg
ttccgcagattctgcaatctccatactgaaattgtacggtttgcattgtaa
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