Trichinella spiralis: Tsp_11865
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Entry
Tsp_11865 CDS
T01609
Name
(RefSeq) RING finger protein 44
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_11865
Enzymes [BR:
tsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Tsp_11865
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Tsp_11865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
FANCL_C
zf-RING_16
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
10898706
NCBI-ProteinID:
XP_003372973
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAETEPTTAARPTQINVNKRRLSHSNSLVTDEPARTRTCQFNLPNSVEHVTMNYPSSIGV
QSHLHTSQRESTTAYVFHPRVAPLVRRAPADHGISRYHSTPNRNLPSAGICDGRPTHHLI
HRHLLLPNRAHSHVGAQTSQPPVNSIFPSLCCLTGGNTPCQLHHLSHTHTHTSFEEAVNA
RAGAAWTVFDGLTFGGMSPHRPNMFASANASLLLSRPNVNVVSVNVQNTVNRTVPLGEQS
FHQMAYLNDSVGGQSDSSNLSGTRSPSPDLNPDNISFVEFNSYVDGSDRRFQWLQEEAQN
FLRFMESSLHMRNSGLTRDEIDRIPCYRFGTKSKEVNENQLSCVICLSNFEIRQLLRELP
CSHCYHSKCVDKWLRRGRGKEKTLSNRTCPICRRVAKDDQPHPSTSKAYGY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaactgaaccaacaacagccgcgagaccaactcaaattaacgttaacaagcgt
cgattgtcccattcgaacagtttagtgacagatgagccggctcgcactcgcacttgccag
tttaatctgccaaattcggttgagcatgtgactatgaactatccatcatcgattggcgtt
cagtctcatttgcacacatctcaaagagaatcaactactgcatacgtattccatccacga
gttgctccactagttcgtcgcgcgcctgccgatcatggtattagtcgataccattcgacg
ccaaaccgtaatttgccaagcgctggaatttgcgatggtcgtccaacacatcaccttatc
catcgtcatttgctgcttccgaatcgtgctcattcgcatgttggtgctcaaacaagccaa
ccgccagttaattcaatttttccttccctgtgctgtttgaccggcggaaatactccttgc
caattgcaccatttatctcacactcatacgcacaccagctttgaggaggcggtcaacgcc
cgtgccggtgcagcgtggacagtttttgacggtttgacgtttggcgggatgtcgcctcat
cggccgaacatgttcgcctcggctaacgctagcctgctgttgtctcggcccaatgtgaac
gtcgtctcagtgaatgtgcagaatacggttaatcgaaccgtgcctttgggcgaacaatca
ttccatcaaatggcgtatctgaatgacagtgttggtggacaaagcgatagttcgaattta
tccggtactcggtccccatcaccggatttgaacccggacaatatttcttttgtggaattc
aattcgtacgtggacgggtcggatcggcgctttcaatggttgcaagaagaagcgcagaat
tttctgcgtttcatggaatcatcattgcacatgcgaaactctggtttgacacgggatgaa
attgatcgaattccgtgctatcgcttcgggacgaaaagtaaagaagtgaatgaaaatcag
ctttcgtgcgtgatttgtttgagcaatttcgaaatccgtcagttgctgcgtgaattgcct
tgcagtcattgctaccatagtaaatgtgtggacaaatggctccgacgggggagggggaag
gagaaaacattgagtaatcgtacttgtccaatttgccgtcgagttgcgaaagacgaccag
ccgcatccatcgacaagcaaagcttacggctattga
DBGET
integrated database retrieval system