KEGG   Trichinella spiralis: Tsp_11878
Entry
Tsp_11878         CDS       T01609                                 
Name
(RefSeq) deoxyribonuclease II superfamily
  KO
K01158  deoxyribonuclease II [EC:3.1.22.1]
Organism
tsp  Trichinella spiralis
Pathway
tsp04142  Lysosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    Tsp_11878
Enzymes [BR:tsp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.22  Endodeoxyribonucleases producing 3'-phosphomonoesters
    3.1.22.1  deoxyribonuclease II
     Tsp_11878
SSDB
Motif
Pfam: DNase_II AsnRS_N
Other DBs
NCBI-GeneID: 10898567
NCBI-ProteinID: XP_003372986
LinkDB
Position
Unknown
AA seq 373 aa
MQMIIKFQFAKSAVSIHISRIGNNIKGLKFYFIKSNTASKYACEWHCYYRVILYKPPGEK
RGKIIVAAAAAWAAYPQDLDNGAGHSFQKALESVTGTHANKNFFAYNNAAAGVVGVKTKS
NSKGFCRIKKNVAINDACLGVVILDIRAGTDEAAWIVHTVPGYPKPKVAYTFPASEYANG
HMLICLTIAESQIEPIAVALFVASPFIYYNDVPDAEVSTRPTLKKLLNGGTPTHPPFSSK
QTIKTQAGAPVSVQIFSKSGRSKYEIYQKIISKQLKKTIKVWSRRDKKLKANCKIPGRHI
LLVSSPISVDGQASSLEKDATNWLIPENGDIFCAVDKPYAISQKYEPAVAVCIQLADIFA
RFNTIAAKVDSCS
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgcaaatgataataaaattccaattcgcaaaaagtgcagtgtctatacatataagcaga
ataggcaataatataaagggacttaaattttatttcatcaaaagtaataccgcgtcgaag
tatgcatgtgaatggcattgctattatagggtgattttatacaaaccacctggagaaaaa
agaggaaaaattatagtagcggcggcagcggcatgggctgcatatccacaagatcttgac
aatggtgctggtcattcttttcaaaaagcattagaaagtgttactggaactcatgcaaat
aaaaatttctttgcatataacaatgctgcagctggagtagtaggagttaaaacaaaatcg
aatagcaaaggtttttgcagaattaaaaaaaacgttgccattaatgatgcatgtttaggt
gttgtaatattggatattcgtgctggaacagatgaagctgcttggattgtacatacagta
cctggttatccaaaaccaaaagtggcatacacatttccagcatcagaatatgcaaatggt
catatgttgatttgccttacaattgctgaatctcaaattgaaccaatagcggttgctttg
tttgtggcatcaccattcatctattacaatgatgttcctgatgcagaagtaagtacccga
ccaaccctaaaaaagctcctgaatggaggaactcctacccacccacctttttcatcaaaa
caaaccattaaaacacaagcaggagcgccagtttcagttcaaatattcagcaaatctgga
agatcaaaatatgaaatataccagaaaataatatcaaaacagttgaaaaagacaataaaa
gtttggtcaagacgagataaaaaattgaaagcaaattgtaaaattcctggaagacatata
cttcttgtttcaagtcccataagtgttgatggacaagctagtagtttagagaaggatgct
acaaattggttgattcctgaaaatggcgatattttctgtgcagttgacaaaccttatgcc
atatcacagaaatatgaaccagctgttgcagtttgtattcagttagcggatatttttgca
cgtttcaatactattgctgccaaagtggattcctgttcttaa

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