Trichinella spiralis: Tsp_11878
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Entry
Tsp_11878 CDS
T01609
Name
(RefSeq) deoxyribonuclease II superfamily
KO
K01158
deoxyribonuclease II [EC:
3.1.22.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Tsp_11878
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.22 Endodeoxyribonucleases producing 3'-phosphomonoesters
3.1.22.1 deoxyribonuclease II
Tsp_11878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNase_II
AsnRS_N
Motif
Other DBs
NCBI-GeneID:
10898567
NCBI-ProteinID:
XP_003372986
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MQMIIKFQFAKSAVSIHISRIGNNIKGLKFYFIKSNTASKYACEWHCYYRVILYKPPGEK
RGKIIVAAAAAWAAYPQDLDNGAGHSFQKALESVTGTHANKNFFAYNNAAAGVVGVKTKS
NSKGFCRIKKNVAINDACLGVVILDIRAGTDEAAWIVHTVPGYPKPKVAYTFPASEYANG
HMLICLTIAESQIEPIAVALFVASPFIYYNDVPDAEVSTRPTLKKLLNGGTPTHPPFSSK
QTIKTQAGAPVSVQIFSKSGRSKYEIYQKIISKQLKKTIKVWSRRDKKLKANCKIPGRHI
LLVSSPISVDGQASSLEKDATNWLIPENGDIFCAVDKPYAISQKYEPAVAVCIQLADIFA
RFNTIAAKVDSCS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgataataaaattccaattcgcaaaaagtgcagtgtctatacatataagcaga
ataggcaataatataaagggacttaaattttatttcatcaaaagtaataccgcgtcgaag
tatgcatgtgaatggcattgctattatagggtgattttatacaaaccacctggagaaaaa
agaggaaaaattatagtagcggcggcagcggcatgggctgcatatccacaagatcttgac
aatggtgctggtcattcttttcaaaaagcattagaaagtgttactggaactcatgcaaat
aaaaatttctttgcatataacaatgctgcagctggagtagtaggagttaaaacaaaatcg
aatagcaaaggtttttgcagaattaaaaaaaacgttgccattaatgatgcatgtttaggt
gttgtaatattggatattcgtgctggaacagatgaagctgcttggattgtacatacagta
cctggttatccaaaaccaaaagtggcatacacatttccagcatcagaatatgcaaatggt
catatgttgatttgccttacaattgctgaatctcaaattgaaccaatagcggttgctttg
tttgtggcatcaccattcatctattacaatgatgttcctgatgcagaagtaagtacccga
ccaaccctaaaaaagctcctgaatggaggaactcctacccacccacctttttcatcaaaa
caaaccattaaaacacaagcaggagcgccagtttcagttcaaatattcagcaaatctgga
agatcaaaatatgaaatataccagaaaataatatcaaaacagttgaaaaagacaataaaa
gtttggtcaagacgagataaaaaattgaaagcaaattgtaaaattcctggaagacatata
cttcttgtttcaagtcccataagtgttgatggacaagctagtagtttagagaaggatgct
acaaattggttgattcctgaaaatggcgatattttctgtgcagttgacaaaccttatgcc
atatcacagaaatatgaaccagctgttgcagtttgtattcagttagcggatatttttgca
cgtttcaatactattgctgccaaagtggattcctgttcttaa
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