Trichinella spiralis: Tsp_11971
Help
Entry
Tsp_11971 CDS
T01609
Name
(RefSeq) putative zinc finger E-box-binding homeobox 1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
tsp
Trichinella spiralis
Pathway
tsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Tsp_11971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_11971
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsp04147
]
Tsp_11971
Membrane trafficking [BR:
tsp04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
Tsp_11971
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
Tsp_11971
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tsp_11971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
Ank_2
BAR_3
PH
Ank
Ank_5
Ank_3
Ank_4
PH_11
PH_21
TagF_N
Motif
Other DBs
NCBI-GeneID:
10903043
NCBI-ProteinID:
XP_003371380
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MCLMSSSKGIDIWLRVSRSLDDALWKNAHVSKLKDHEGSDAKNELTAVGTCFAHTCLDYI
FQINLVHASKKHEILEAFLSFVYATETFFHQGYDLFGPEWLETKNQMVETLSYFKAQEKQ
TERKMQDRHALVPREIFQHPPSISLDPDIVMEGYLFKRSSRTIKTWNRRWFIIKNNKLVY
FRREVDFSSPAFLTNFYNFCTVMEDDLRLCLVRPAPAACDRRFCFEVVTPHKTHMLQADS
ESLRAAWINALQRTIEAALHYGSLNSSSSCSGSDTMHKSQSSHAITTADEILNVCGNQQC
ADCGSKNPKWASVNLGITLCIECCGIHRSLGVQVSKVRSLTLDAWEPDQVHLMLLLGNEK
VNRIFMAFRPDFSYLMPNSPRFAREAWIKAKYLKRRFMKSFAYRDRLYQRHLIFCSGNQL
VLHGLALRYYELSSSSFPSVDCCGCEGFANARELGGRRTTDLTISNERAHARRSWVSEST
LNFSELDSALCTEIRQQTDKLLLATKNDDILAMFQAIASGASLNFSDGNSEKKTALHEAV
CRNSSTSCELLFLNGARINVCDIHQRTPLHYACLLGSAAMVLFLLKRGADQGVCDKSGKT
PLDIAIEQANADIVTLLRLAKLNDEFKDEYSSSSELNFSSVCRDFTLAYSKPDILNRPKE
Y
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttgatgagtagcagcaagggaattgatatttggctgcgggtcagtcgaagtttg
gatgatgcattgtggaaaaatgcacacgtctcgaaattgaaagaccacgaaggtagtgat
gctaaaaatgaattaaccgctgttggtacttgttttgctcacacttgcttggattacatc
tttcaaatcaatttggtacatgctagcaaaaagcacgaaatattggaggcgtttttgtcg
tttgtgtatgcaacagagacgttttttcatcaaggttacgatttgtttggtccagaatgg
cttgagacgaagaatcagatggtggaaacgttgtcttatttcaaagctcaggagaagcaa
accgaacggaagatgcaagaccgtcacgcattggtgcccagggaaatatttcaacaccct
ccaagtatatctcttgatccagacattgttatggaaggttatttgtttaaaaggtcctcc
agaacgattaaaacttggaacaggcgttggtttatcattaagaacaataaattggtctat
tttcgtcgtgaagtagatttttctagtccagcatttttgacaaatttttacaacttttgc
accgtgatggaagacgatttgcgactgtgtctcgtacgccctgcaccggctgcttgcgat
cgtcgtttctgttttgaggtggtcacaccgcacaaaactcacatgcttcaagcggattcg
gaatcattacgcgccgcttggatcaatgcgttgcaacggacgatcgaagcggctcttcac
tatggttctttgaacagcagtagttcgtgcagcggcagtgataccatgcataaatctcag
tcatcgcatgcaattactacagcagacgaaatactgaacgtttgtggcaatcaacagtgt
gctgactgtggttcgaaaaatcccaaatgggctagtgtaaatttgggcattacattatgc
attgaatgctgcggcattcatcgaagtttgggggtccaagtttcgaaagtacgttctttg
acacttgatgcttgggaaccggatcaagtacatctgatgttgttactggggaatgaaaaa
gtgaatcgtatttttatggcttttcgaccagatttcagctacttgatgccgaattctcct
agatttgcaagagaagcatggataaaagcgaaatatttgaaacgccggttcatgaaatct
tttgcgtatcgggaccgcctttatcagagacatttgatattttgctctggaaatcagtta
gttttgcatggattggctcttcgttattatgaactttcaagtagttcttttccatcagtt
gattgttgtggatgtgaaggttttgccaacgctagggaacttggcggccgtagaacaacc
gacttaacaatatcaaatgaacgagcacatgctaggcgatcatgggtctctgaatcgacg
ttgaatttcagtgaattagattcagcgctgtgtactgaaatccgccaacagacggataaa
ttactacttgctacaaagaacgacgacatcttggctatgtttcaagctattgcttctggt
gcttccctgaatttttctgatggcaattcagagaaaaaaactgctcttcacgaagcagtt
tgccgtaattctagcacatcttgtgagctgctgtttctaaacggtgccagaattaatgtc
tgcgatattcaccaaagaacacctctccattacgcttgtctcctgggcagtgcggccatg
gttttatttttgctaaaacgaggagctgatcagggtgtttgcgataagtcaggtaaaact
ccgttggatatagcgattgaacaagccaatgctgacattgttactttacttcgacttgcc
aagttaaatgatgaattcaaagatgaatacagcagtagcagtgaattgaatttcagtagt
gtatgccgtgatttcactcttgcctacagtaaacctgacatacttaatcggccaaaggag
tattaa
DBGET
integrated database retrieval system
