Trichinella spiralis: Tsp_12012
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Entry
Tsp_12012 CDS
T01609
Name
(RefSeq) double-strand break repair protein MRE11A
KO
K10865
double-strand break repair protein MRE11
Organism
tsp
Trichinella spiralis
Pathway
tsp03440
Homologous recombination
tsp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tsp_12012
03450 Non-homologous end-joining
Tsp_12012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsp03032
]
Tsp_12012
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_12012
DNA replication proteins [BR:
tsp03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
Tsp_12012
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
Tsp_12012
BRCA1-C complex
Tsp_12012
NHEJ (non-homologous end-joining)
MRX complex
Tsp_12012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
10905859
NCBI-ProteinID:
XP_003368454
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MTKESKISILVATDIHLGFEERSLIRGDDSFKTFEEVLSIAQKKKVDFILLGGDLFHDNK
PSRSTVYRCMELIRKYCFCDHQVKFQLLSNGEVDFYHSAFKHANFQDSHLKVGIPIFTIY
GNHDDIAGNGLCAVDCLHACGLVNLFGKHEGIEELNVVPLIVKKGSTKLALYGFGNVRDE
RLHRMFSKGKVTFPSEDAESCFNLFVIHQNRAQHSLTNYIPITFIPEMMDLVIWGHEHKP
LPDPEWHEKFYVMQPGSTVATSLSDGEAGPKYCYLLHIAGKEFRSEKIELTTNRLFHFED
ITLENTGIPPDSADLEKKVSPNVLYSFGAWILYSFIFVQVEKYCVQHVESLLKKCKLTLE
EEMDRPLLPLIRLRLHVNHEFKKFSVKQFGKQFVDRVANPMDLLIFVTKRDSVPMLTAVD
KKLLSAAVRKTSQEACERIEAVQLDPEDAGQVTEYLVEIREKRNANKKNTDAEVDADNLA
ENISNNITTENCDEVSRSTVVEENVLNNANESNKCNAVADQNVDISFASNTDSSDAAEAE
IPTTTRGGRRQGRRASRKRSLCRSDEMVNETTEMAANVSKRGRGRGARNVRQGRAGQTAN
RKIRQRDLLVVPSSPVGGELASEDTITQMVDFDEESNNVTKHQTTTSMTTRSSQYKKFKI
FDSDSE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagaaagcaaaatcagcattctcgtcgcgacagatattcatcttggtttcgag
gagagaagtctgattcgtggtgatgattcatttaaaactttcgaagaagttctttcgatt
gctcagaaaaagaaagtcgattttatacttctaggtggcgatttatttcacgataacaaa
ccatcaagatcaacagtttatcgatgcatggagctgattcgcaagtactgcttttgcgat
caccaggtgaagttccagttgctgagcaacggcgaagtggatttttatcactcagctttc
aagcatgctaatttccaagattctcatttgaaagttggaattccaattttcaccatctac
ggcaatcacgacgacattgctggcaacggcctgtgcgcggtcgactgtttacacgcctgc
ggtctggtcaatctgttcggcaagcacgaaggcatcgaagagctgaacgtggtgccgctg
attgtgaaaaagggaagcacgaaattagcactgtacggtttcggcaatgtgcgcgatgaa
cgtctgcatcggatgttttccaagggtaaagttacatttccgtctgaagatgcagaaagt
tgtttcaacttgtttgtaattcatcaaaatcgagctcagcatagtctgaccaattatata
cccattacattcatcccggaaatgatggatttggtcatctggggtcacgagcacaaacct
ttaccagatcccgagtggcatgaaaagttttacgtcatgcaacccggcagtacagtagct
acttcgctgagcgacggtgaagcaggcccaaaatattgttaccttttgcatattgcgggc
aaagagtttcgttccgaaaaaattgaactgacaacgaacagacttttccacttcgaagat
atcacgctggaaaacactggcataccaccggatagtgcagatctcgagaaaaaggtatcg
cccaatgtgctctattccttcggagcgtggattttgtattcctttatttttgttcaggtc
gaaaagtactgcgttcagcatgttgagtcgttgttgaaaaaatgcaaattgacattggaa
gaagaaatggaccgtccattgttgccgttgattcgtctacggttgcacgtgaatcacgag
ttcaagaaattcagcgtcaaacagtttggcaagcagtttgttgatcgcgtggccaatccg
atggatttgctgatatttgtaacgaaacgagattcagttcctatgttgactgctgtcgat
aagaaacttctgtccgccgctgtacgcaaaacatcgcaagaagcatgcgagagaatagaa
gcagtgcaattagacccggaagatgctggtcaagtaactgaatatttggttgaaattcgc
gaaaagcgtaatgctaacaaaaagaacactgacgccgaagtcgacgctgataatttagcg
gaaaatatttcaaataacatcactactgaaaattgtgacgaggtcagtagatcaacagtt
gtcgaggaaaatgttttgaataacgccaatgaaagtaataagtgtaatgctgtagccgat
caaaatgttgacatatcatttgcatcgaacacagatagttctgatgcggctgaagcggaa
atccctacaacaacgagaggtggtcggcgacagggaaggagagcatccagaaaaagatca
ctgtgcagaagtgatgaaatggtgaatgaaactacggaaatggctgcgaatgtgagcaaa
cgtggcaggggtcgaggtgctagaaatgtgaggcaagggcgagcaggtcagactgccaat
agaaaaattcgtcagcgtgatttgctcgtagtcccttcttcaccggttggaggtgagctg
gcgtcggaagatacgataacgcagatggtggattttgatgaagaaagcaacaatgtcaca
aaacatcaaacgacaacttcaatgacgacgagatcttctcaatacaaaaagttcaaaatt
ttcgacagtgatagcgaataa
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integrated database retrieval system
