Trichinella spiralis: Tsp_12274 Help Entry Tsp_12274         CDS       T01609                                  Name (RefSeq) putative cadherin domain protein   KO K16669   protocadherin Fat 4 Organism tsp  Trichinella spiralis Pathway tsp04392   Hippo signaling pathway - multiple species Brite KEGG Orthology (KO) [BR:tsp00001]  09130 Environmental Information Processing   09132 Signal transduction    04392 Hippo signaling pathway - multiple species     Tsp_12274  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:tsp04515]     Tsp_12274 Cell adhesion molecules [BR:tsp04515]  Cadherins   Cadherin related    Tsp_12274 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Laminin_G_2 Cadherin_2 Laminin_G_1 EGF RET_CLD1 hEGF EGF_CA EGF_TEN Cadherin_pro Sde0182_C EGF_3 Motif Other DBs NCBI-GeneID:  10909681 NCBI-ProteinID:  XP_003366920 LinkDB All DBs Position Unknown AA seq 2935 aa AA seqDB search MQCSILSKQVPKISTIINITITDENNTPPQLSEYFYKFHIAEDVPPGTEVGFIKAVDVDS NTKLLFSILEMENLFTIHPNLGIITTTSKLDREEMTFHYFTVQISDGINVITAPVEVIVT DVNDNAPVFQNETFIFHLPKSVQKEHIIGIIKATDNDAGNNGKITYHLQAPEPHLKSVLT LDSVNGFIGIKSTWNFDKIPLIHFKVCATDNGFPSLKSTAQVIIVFEEDKRLPVFKDSSY IISVQENVSVNSELLKLNLASDQENLFYYTILFGDPLNQFWISRKGILYVNKALDRETRH EHHLTVIAHDEVTLEKSHFTASATIKIILIDINDNAPVFTSSNTAILHDSSPVGTAVMTV KAIDPDEGLNGHVQYFIDSSSAGDFSLNPVYGTLRVNAMLNKKSYKLTIWAYDQGENQLR TSSDLNVVLLDTTVNHFILEADSTEITIFENEPVGKVLLNVKVKYEKDIHGESALLWIEQ SENSDDFLLSQNGQLTIARPLSYIRKPVYILKLYGKGTLHSNPSDGNISSLVVTIRLKDV NDNSPIFIQNPIYIDVVENTAMDNQFTIIGRIKAIDKDHSHNSQIFYSIVQGNTSIFQID SASGELFMTGILDREECENYTLEIQAIDSGFPPLSSKATVFINVIDLNDNPPIFDQSHYR AFLSENQPPSTKVVQVHAIDKDSGVNGVVKYKLFDNSVPFVINEKTGWLSTTESLDRETQ KQWNIWVLAEDCGLYNKHTSKVEIQIIVNDENDNAPIFHNQQENIYVKNSLQSGDFVYAV DASDLDEGKNSLLKFYLNGKDADKFIINVSTGVIVSKADLKFWNSYRLTVEVSDHGFPEK QSFLSLQFITRPPSEFPVFQSDFQQVYSIAENKRNTFVTLAVARSSKQAPFNRIRYSIAS GNIGQAFTIDSESGELFTSENIDYETHCHYELWIAAVDNDSPPMISFLKLYINVEDVNDN SPVFNQSIYEVSIPEEEPEFFYVTQVTATDLDSENNGLIEYSIDKNQSNVCDLFQIDPTS GIITTKVPLDRETKAQYHFVVVAKDQGKPALFGYAVVVVNLEDKNDNAPRFTHLFSAHVR EDAPLDTFITQIVAADLDEVSDNTYILENGDDNTFRIEKDTGRIFLNKSLDRETISEYAI KVSVLDSFWKVMTSLTISVDDVNDNAPVFSKHSYSFYVPETKSIPVLIGRLEATDADSQE NSRITYKMYSQSSQFSIDSVTGAIYSHKELIYYNTSELNIHHLKIIAHDSGRPVLSSITT VSVFVLPCDAKLINLQKPSKMIPVQVGTPASTMIYQVQNKVKCAHCKLMEIRYSLKQEEN WFEIDPKTGWIMTNTTIAKDALDRKFFVKIVAEHETVTDEIEIGIVITEENRYSPRFLSS NYTINILKNTSLNATIFTAIAQDNDSGLNGLIQYESACVDVSPCPFAIDSDSGAVKLISP LNLDDHDSYVLKIKATDSAHHPKTSHAALTVLTQRGYSRIPTFPHQKDDAFVHPSSGVNF TVYTFAVENSENMPSSQCEYKIMKGNEKQLFYLDMFSGQLVLVSPIGIEDYKSTMPLLVR CINPNTSMFSEMTLYVHIGTVHENFKPTFARRVYKFHSHAMESLIGFVKVQHEADDYQYF LGISGLKSNLEVDANSGAVIMKKQIPSKMVVTVLSRRSQFKSAFDFDVATLTVRPADNGT FPSFDQTAYNVTISENSAIGTKVIAPIINGPLGHYCRAVIVDGNAKSSFMVDRRAVITVK GELDYESQSVYELLLALVCLEEDQWLSTCQVRIDISDVNDNGPQLHESNRVGYVMENDPA GTHVLTLLPYDLDSSVNQGPFKFKMLHPEQLPFDLDPQSGILKTTRPLDREFQEEYIIAV SIADNGIPPKTTITSIKIVILDMNDMAPESEMLHVTVLSVQGAQFYGVSADVHPLDMDLI GNYSCQPIRTDHPLKVDAKCALLIGSIPSDHVPVLMHLNGDDGKHLPVDFDLSIKFLTYT NYTAQNSVILHFDLMKQNLLEMAIQPLQQALEKEGYSSLLTQAECKQRNCSAWMTLYDSS HHIMPASELTASRIQLIWNRLKLKLDQVTLTHVQHGMCTANSCLNGGICIEITESSGSFS YFRENENIFIFPKIVKSYRCDCSSTYTGEFCETTVDRCAINSCLNGGTCFHDELQLKTRC LCPEGYEGSRCENDVDECTISNPCQNNAHCENTDGSYRCICVAGYFGSKCEMPIDRCASN PCLNGGTCVADFDGYKCQCSYAYTGRNCEISSYGFQELSYIELSGLNVRKNELSFEFSTL RRNALLLYWSGTSYRSNSSYVIVDISNGQLRLACSASNGQKYSSTLPRNVTNARWHKLVL RHQLKSIGISISECGENKCTSCDTGNLDCEITFTTCDSAAMFEDLDDSLFVGSANLASRI QSIGYEIASPNFLGCIRDLSLNGAPLNAKSIRSKSNLLDHCPRQVADLCGHTDMCKTSEQ CLDFWDRTECICRGNFISSSCEQAEQTYSLNNGFISYDIGPGVHVRSQFPTFDENAFETW AENELRLHHQSTLPALWLNILFRTTSRDGVLFFSSTGVQFSLIDIVDGFVRYISRTDDLR TVQLNLDEGPTISDGNWHMVSLAKYPQEGLVEFRIDDHGKDAQLFTDLHDFYEQKLTSCS LGGTRNVLRIQGKQLNNFQGCIRRFILNGQLQPMEPSHRQSNFLTVRESQNVLFNVSCAN AGAQKTELEAKRQRPTLLIICITFSICLKKHKSQADPTVGAGQSPGIVGHNSTSGLEFRI NQRSRLYNETGPYADKTQRYVQPSKFVRLGHFAGYIHTWPTKSDRHTALTRRRLPPLFTG HFTRWKFLKRQYFPCPNDWSVHPTEADEVFAKLTKRTTLDIVDHRKAAIFEHHSLVDDQS NRNVRLFFSFLPFPPPLDMLSTYIPMLINSDPVIRANAKLQIYIIAQNKTINRTE NT seq 8808 nt NT seq  +upstreamnt  +downstreamnt atgcagtgttctattttgagtaagcaagttccgaaaatcagcacaattataaatatcacc ataacggatgaaaacaacactcctccgcaattatctgaatacttctacaaattccatatt gctgaggatgttccacccggtacagaagttggattcatcaaagctgtagatgttgacagc aatacaaaactgttgttttcgattttggagatggaaaatctattcacaattcatcccaat ttgggaataatcaccacaacttcaaagcttgatagagaagaaatgacttttcattatttt actgtccagatcagtgatggaataaatgtaataactgcgccggttgaagttattgtaacg gatgtgaatgacaacgcccctgtatttcaaaatgagacatttatttttcatttaccgaaa tctgttcaaaaagagcacataattggaataattaaagcgactgacaacgatgctggaaat aatggaaaaataacatatcatcttcaagctcctgaaccacacttgaaatccgttttaact cttgattcagttaatggatttataggaataaaatcaacgtggaattttgacaagatacct ctcatacatttcaaagtgtgtgcaactgataatggttttccatcgttaaaaagtactgca caagtgatcattgtttttgaagaggacaaaagactgccagtgttcaaagattccagttac attatatctgttcaggaaaacgtttctgtgaacagtgagcttctaaaactcaatttagct tctgatcaagaaaatttattttattacacaatattatttggtgacccactgaatcaattt tggattagtcgtaaaggaatattgtatgtgaacaaagctttggatcgagaaacacgtcat gagcatcatcttacagttattgctcacgatgaagtgacattagaaaaaagtcatttcaca gcttcagctaccataaaaattattcttattgatatcaatgataatgcacctgtttttaca tcatcgaacacggcaattttgcatgacagcagtccagttggcactgcagttatgacagtt aaagccattgatccggatgaaggcttaaatggtcacgtacaatatttcatagattcttcc agcgctggtgactttagtttaaatccagtttatggaactcttcgtgtaaacgcaatgctc aataaaaaaagttacaagttaactatttgggcttatgatcaaggtgaaaatcagctgaga acatcttctgatctgaatgtcgttcttcttgacactacagtcaatcactttattcttgaa gctgattctactgaaataacgatttttgaaaatgaaccggttggaaaagttttactgaat gtaaaagtaaaatatgaaaaagatattcatggcgaaagtgcattgctttggattgagcag tctgaaaacagtgatgactttcttttatctcaaaatggacaactgaccattgctcgtccc ctcagttatatccgaaaacccgtatacattttgaaactttatggaaaaggcactttacat tccaatccatctgatggcaatatcagttctttagtggtgactattcgtttgaaagatgtt aatgataattcaccaatattcatccaaaatccaatctatattgatgtcgtcgaaaatacg gctatggataatcagtttacaataattggccgcataaaagccattgacaaagatcactcc cacaatagtcaaatcttttattcaatagtgcaagggaatacaagcatttttcaaatagat tctgcttctggagaactgtttatgacaggcattttagatcgagaagaatgtgaaaactac actttagaaatacaagctattgactcaggatttccaccgctttcatcaaaagcaaccgtt ttcataaatgttatagatttaaatgacaatccaccaatttttgatcagtcacattatcgt gcttttttaagtgaaaatcagccaccttctaccaaagtagtccaagttcatgccattgac aaagattctggagtaaatggtgtagtaaaatataaactgtttgacaattctgtacctttt gtgattaatgaaaaaactggttggctttctacaactgaaagtcttgatcgcgagactcag aaacaatggaatatttgggttttagcagaagactgcggtttgtacaacaagcacacgtca aaagtggaaattcaaataattgtgaatgatgaaaatgataacgctcctatttttcataat cagcaagaaaacatatatgtgaaaaattcacttcagtcaggtgattttgtttatgcagtt gatgcaagcgatttggatgaaggaaaaaacagcttgcttaaattttatttaaatggaaaa gatgcagataagtttattataaacgtctctactggagtgatagtatccaaagctgatctg aagttttggaatagttaccgactaactgtcgaagtatcagatcatggttttccagaaaag caatcatttcttagtttgcaatttattactcgaccgccgtcagaatttcctgtctttcag agtgattttcagcaagtttattcaattgctgaaaacaagcgaaacacgttcgtcacctta gctgtagctagatcatccaaacaggctcctttcaatcgtattcgctattcaatagcatct ggtaatattggacaagcatttaccatagattctgaatccggtgaattattcacaagtgaa aatattgactatgaaacgcactgccattacgaattatggattgcagccgttgataatgac agtcctccaatgatatcatttttaaaactttacataaatgtagaagacgtaaatgacaac tcacctgtgttcaaccaatctatatatgaagtttcaattcctgaagaagagcctgaattt ttttatgtcacacaagtgacagctacagatctggacagcgaaaacaatggactgattgaa tattcgattgataaaaatcaaagtaatgtttgcgatttgtttcaaattgacccaaccagt ggtattataactacgaaagtaccacttgatcgagaaacaaaagcacaatatcattttgtg gttgttgcgaaagatcaaggaaagcctgcattatttggatatgcagttgttgttgtaaat ttagaagacaaaaatgacaacgcacctcggtttacgcatcttttttctgcccacgtaaga gaagatgcacctttggatacgttcattacacagattgtggctgctgacctcgatgaagtc tcggacaatacttacattctggaaaatggtgatgataatacattcagaattgaaaaagac actggtagaatttttttaaataaaagcttggatcgagaaactatatctgaatatgcgata aaagtttctgttctggatagcttttggaaagttatgacatcactaacaataagtgtcgat gacgtcaacgataatgcgccagtgttttctaagcacagttatagtttttacgttccggaa acaaaaagcattccagttttaattggacggttagaagcgacagacgctgatagtcaagaa aactccagaattacatataaaatgtattcacagtcgagtcagttttccattgattccgtt actggtgctatatactctcataaagaactcatctattataatacatcggaattgaatata catcatttgaaaataatagcccatgattctggtcgtcctgttttgtcaagcatcacgacg gtttccgtttttgttctaccatgtgatgctaaactgataaatctgcagaagccatccaag atgattcctgtgcaagtaggaacaccagcgtcaactatgatttatcaagtacagaataaa gtcaaatgtgctcattgtaagttaatggaaatacgctattcactgaagcaagaagaaaat tggtttgaaatcgatccaaaaacaggatggatcatgacaaacactactatagcaaaagat gctttggataggaaattcttcgtgaaaatagttgctgaacatgagacagttacagacgaa attgaaattggcatcgtcattacagaggagaatagatattctcctcgatttctatcctcc aactacacaatcaacattttgaaaaatacaagcttaaatgccacaatcttcactgctatt gcacaggataatgattctggactaaatggtttgattcaatatgaaagtgcctgcgttgac gtttctccatgcccttttgcaatcgattcagacagtggtgcagtaaaacttatttcacca ctcaatcttgatgatcacgacagttacgttttgaaaatcaaagctactgattctgcacat catccaaaaacttctcatgctgcattgacggttttaacgcagcgtggttacagccgtatt ccaacgtttccacatcagaaagacgacgcatttgttcatccgagcagtggagtgaatttt actgtgtacacatttgcggtagaaaattctgaaaacatgccgtccagccagtgtgaatat aaaataatgaaaggaaatgaaaaacaattattttatttggatatgttcagtggtcaactg gtgcttgtttctccaattggaattgaagattacaaaagtactatgccattattagtgcgt tgcatcaatccaaacacttcgatgttttctgagatgactctttatgtgcatattggcact gttcatgaaaattttaagccaacatttgcccgtcgagtgtacaaatttcactctcatgca atggaaagcttgatcggatttgtaaaagtgcaacatgaagcagatgattatcagtatttt ttgggaatcagtggactgaaaagtaatttagaagttgatgcaaactccggtgcagttatc atgaaaaaacaaattccatcaaaaatggtcgttacagttttgagtaggcgttctcagttt aaatctgcgttcgactttgacgtagcaacattaacagttaggccagcagacaatggcaca tttccaagttttgatcagactgcttataatgtgaccatttcagagaacagcgcaattgga acgaaagttattgcacctataataaatggtccattggggcattattgtagagcagtaatt gtagatggaaatgctaaaagttcatttatggttgacagacgtgcagttattactgtcaaa ggtgagctggattatgaaagccagtctgtttatgaactacttttggcgttggtttgcctg gaagaagatcaatggttatcgacctgtcaggtgaggattgatatttcagatgtcaatgat aacggtcctcagctgcacgagtcgaacagagttggctatgttatggaaaatgatcctgct ggaacgcatgttcttacattgttgccttacgatttggattcttctgtaaatcaaggtcca tttaaattcaaaatgttacatcctgaacaactgccatttgatttggatcctcagtctgga attttgaaaaccactcgtccattggatcgagaatttcaagaagagtatattattgctgta tccatagctgacaacggaataccacctaaaacaactataacaagtatcaaaatagttatt ttggatatgaatgacatggcacctgaatctgaaatgctgcatgtgaccgtgttgagtgtt caaggtgcccaattttatggagttagtgccgatgtacatcccttagatatggatctcatt ggaaattattcttgtcagccaattcgaacagatcatccacttaaagtggatgctaaatgt gcacttttgattggtagcattcccagtgatcacgttcctgtactgatgcatctgaatggt gatgatggaaagcatttaccggtggattttgacctttcgataaaatttttaacttataca aattacactgctcaaaacagtgtaattttgcatttcgacttgatgaagcaaaatttatta gaaatggccattcaacctttgcaacaagccctagaaaaggaaggctattcgagtttgtta acacaggccgaatgcaaacagagaaactgttcagcttggatgacactttatgactccagt catcatattatgccagcttcagaattaaccgcatcacgcattcagctgatttggaatcgc cttaaactgaaactagaccaagtgacgctcactcacgttcagcatggaatgtgcacggca aattcttgcctaaatggcggaatttgcatcgaaataactgaatccagtggatcattttct tattttcgagaaaatgaaaacatcttcatatttcctaaaatagtgaaatcctaccgttgt gactgtagttctacgtatacaggagaattttgcgaaactacagtggatagatgcgcaatt aacagttgcctaaatggaggtacatgcttccatgatgaattacagctgaagactcgatgt ctttgccctgaaggatatgaaggaagtcgctgtgaaaacgatgtcgatgaatgcacaatt tcaaatccttgtcagaataatgcgcactgtgaaaatacggatggatcatatcgttgcatt tgcgttgcaggatattttggtagcaaatgtgaaatgcccatagacagatgcgcttcgaat ccttgtctgaatggtggaacatgtgttgcagattttgacggctacaagtgtcagtgcagt tatgcatacacaggtcgaaattgtgaaatatctagctacggattccaggaactgtcttat attgaattatccggcttgaacgttagaaaaaatgaattgtcattcgaattttctactttg cgaagaaacgcacttctactatactggagtggaacaagctacagatcaaactccagctat gtaattgtggatatttcaaatgggcaactcagattagcctgctcagcgtcaaatgggcaa aagtactcctcgacattacctcgcaacgttaccaatgctaggtggcacaaacttgtactg cgtcatcaactaaaaagcattggaatttcaatatcggaatgtggggaaaataaatgcact agttgtgatactggaaatcttgattgtgaaatcacttttacaacttgcgacagtgctgca atgttcgaagatttggacgattctttgttcgtgggcagtgctaatttagccagcagaata cagtcaataggctatgaaatagcatcgccaaatttccttggatgcatccgtgatttaagt ttaaacggtgcgccgttgaacgctaaaagcattcgcagtaagtcaaacctactagaccat tgcccaagacaagtagctgacctgtgtggccatacggacatgtgcaaaacctctgaacag tgtttggacttctgggatagaacagaatgcatttgtcgaggcaatttcatttcatcctct tgtgaacaagctgaacaaacgtacagtttgaataacggcttcatctcttacgacattggt cctggagtgcatgtgaggagccaatttccaacgttcgatgaaaatgcatttgaaacctgg gccgagaatgaactgcgtctgcatcatcaaagtacacttcctgccctttggctgaacatt ttatttcgaacaacaagccgcgacggtgtattatttttctcatctaccggagtgcagttc tccttgatagatatcgtggacggtttcgtacgttacatcagccgtacagacgacctgaga accgtgcagttgaatttagacgaaggaccgactatatccgacggcaactggcacatggta tcgctggctaaatatccacaagaaggtttggtagagttccgcatcgacgatcacggaaaa gatgcgcaacttttcaccgacttgcacgacttctacgagcagaaattgacttcctgctcg ttgggagggacaagaaatgtgcttcgaattcaagggaaacagctgaacaatttccaaggc tgtattcgaaggttcattctcaacggtcagttgcagccgatggaacccagccaccggcaa agcaactttctcacggtccgtgaatcacagaacgtgcttttcaacgtcagctgtgccaac gccggtgcccaaaaaaccgaactcgaagccaaacgtcaacgtccgacacttctgatcatc tgcatcaccttttccatctgcctgaaaaagcacaaaagccaagcggatccaacagtcggt gctggacagtcgcctgggattgttggacataattcgacaagcggattggaatttcggatc aatcaaagatccagactatataacgaaacgggaccgtacgctgacaagactcagcgctac gtgcagccgtcgaaatttgtgcgactcgggcatttcgctggatacatccacacttggcca acgaaatccgaccgacacactgccctcacacgccgccgtttaccaccactattcacggga catttcacccgatggaagtttctaaagcgtcaatactttccatgtccaaatgattggtcg gttcatccaacagaagcagatgaggtctttgccaagctaaccaagcgaacgacactcgac atcgttgaccatcggaaagctgctattttcgaacatcactcacttgttgacgaccagtca aaccgtaacgtccgattatttttctcatttcttccttttccaccacctctggatatgctt tcaacatatattccaatgctgataaattcagatccagtaattcgtgcaaatgctaaattg caaatttacataatagcacagaataagacaattaatcgaactgaataa

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