Trichinella spiralis: Tsp_12343a
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Entry
Tsp_12343a CDS
T01609
Name
(RefSeq) deoxyribonuclease II superfamily
KO
K01158
deoxyribonuclease II [EC:
3.1.22.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Tsp_12343a
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.22 Endodeoxyribonucleases producing 3'-phosphomonoesters
3.1.22.1 deoxyribonuclease II
Tsp_12343a
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNase_II
DUF3941
Motif
Other DBs
NCBI-GeneID:
10900268
NCBI-ProteinID:
XP_003366016
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
VLLIDKRQNDAAAWFVHTVPNFLAHLGGYSWPQTETAKGHIFLCLSFKEEFLNSVGKAIR
YQEPYIYANNLPADILNQHKELSNLVNGVEIRVTPFLEHAKFVTKNAQVQANIQAFGKHS
KSFADIYGRVLRNKLSANIRIWAPSDAKSKSICKGQYKLQKIDSPIQFADNQVSREADSA
RWALVEGKNTVCLTTNDYKNSEKKVPGAAVCIENANVYNAFSQAASNVLPCNK
NT seq
704 nt
NT seq
+upstream
nt +downstream
nt
gagttcttttaatcgataaaagacaaaatgatgccgctgcatggttcgtccacactgtgc
ctaattttttggcacatcttggaggttattcttggccacagacagaaacagcgaaggggc
acatatttttatgtttgtccttcaaagaagaattcttaaattctgttggaaaagcgattc
gataccaagagccatatatatatgcaaataatttgcctgctgatattttgaatcagcata
aagaattatctaatttggtaaatggagttgagattcgagtgacacctttcctggagcatg
caaaatttgtaacaaaaaatgcacaagttcaagcaaatattcaagcttttggaaagcatt
caaaatcatttgctgatatttatggaagagttttgagaaataaactatcagctaacataa
gaatatgggcaccttctgatgcaaaatccaaatcgatttgtaaaggacaatacaaacttc
aaaaaatagattccccaatacagtttgctgataatcaagtaagccgtgaagctgatagcg
caagatgggcattagtggaaggaaagaatactgtttgtcttacaacaaatgattacaaaa
attctgaaaaaaaggtgcctggtgctgctgtttgcatagagaatgctaatgtttataatg
cgtttagtcaagcagcgtctaatgttctgccatgcaataaataa
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