KEGG   Trichinella spiralis: Tsp_12412
Entry
Tsp_12412         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K18753  butyrate response factor
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_12412
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     Tsp_12412
SSDB
Motif
Pfam: zf-CCCH_4 zf-CCCH zf-CCCH_UNK zf-CCCH_2 zf_CCCH_4 zf-CCCH_DUS3L zf-CCCH_PAN3 Torus Zn_finger_prot SAM_6
Other DBs
NCBI-GeneID: 10897349
NCBI-ProteinID: XP_003370127
LinkDB
Position
Unknown
AA seq 181 aa
MTVCLVDVASEKRINEETVNNNKKPNLALYKTRMCRYFVNGPGCRFGSNCFFAHNLVELR
PSMYRNFLYKTEPCRNLRTWGHCKYGPRCLYLHGDEQFLIYARTPPSSFASIQPIWPGTS
PVPFFGSSARSASLSTELSIPLDNESSERMLLSVLKMTHAEQMEKYMQIFGKNNFYKSVS
V
NT seq 546 nt   +upstreamnt  +downstreamnt
atgacagtctgtttggtggatgtcgctagtgagaagcgtatcaacgaggaaactgtgaac
aacaacaagaaaccaaatctcgccttgtacaagacccgcatgtgtcggtatttcgtcaac
ggtccgggatgtcgtttcggttccaattgcttcttcgcccacaacttggtcgaactgaga
cccagcatgtacaggaatttcttgtacaaaacggaaccgtgccgcaatttgcgaacgtgg
ggccattgcaagtacggtccaaggtgtttgtatttgcacggagacgaacagttcctgatc
tacgcccgcacgcctccgtcgagttttgcttcgatacagccgatctggccgggcacatct
ccagtgccgtttttcggttcatccgcacgcagtgccagtttgtccaccgaattgtccatt
ccgctggacaatgaatcgtctgagagaatgctgttatcagtgctcaaaatgacacacgcg
gaacaaatggaaaaatatatgcaaatttttggaaaaaacaacttctacaaatcggtatcc
gtttga

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