Trichinella spiralis: Tsp_12515
Help
Entry
Tsp_12515 CDS
T01609
Name
(RefSeq) putative ABC transporter, ATP-binding protein
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_12515
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Tsp_12515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
Fer4
AAA_21
AAA_22
Fer4_6
AAA_16
SMC_N
NACHT
AAA
Rad17
RsgA_GTPase
ORC-CDC6-like
AAA_15
nSTAND3
AAA_29
Fer4_2
Fer4_21
Fer4_7
AAA_28
Fer4_9
Fer4_4
Fer4_10
AAA_5
TsaE
SRP54
Fer4_16
NPHP3_N
AAA_30
AAA_23
Fer4_3
AAA_19
AAA_13
Fer4_8
Motif
Other DBs
NCBI-GeneID:
10899479
NCBI-ProteinID:
XP_003367607
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSKLPKPGHTEQSKITRIAIVNNDRCKPKNCGQVCKKSCPVVRMGKLCIEVTPSSKIAFI
SESLCIGCGICVKKCPYDAISIINLPSNLEKHTTHRYGPNSFKLHRLPTPRPGEILGLVG
TNGIGKSTALKILSGKLKPNLGKYKEPPEWQEILTYFRGSELQNYFTKLLEDNLRAVIKP
QYVDQIPQAAKGLVSDMIAKKDDLKKADAMCRLLDLENVMDRNVADLSGGELQRFAIAVV
CIQRADIYMFDEPSSYLDVKQRLKAAVAVRSLVHSDNFSIVVEHDLSVLDYLSDFICVLY
GVPGAYGVVTMPFSVREGINIFLDGFVPTENLRFRETSLSFKYPSMKKSLGSFELTVEAG
NFSDSEIIVLLGENGTGKTTMIRMLAGRLEPDVNAGEIPQLNISYKPQKISPKSNCKVSE
LLRSKIPDTFVHPQFVAEVLKPLNIEDILDQDVQNLSGGELQRVALVLCLGKSADVYLID
EPHILNAKKTAFIVEHDFIMATYLADRVIVFEGEPSKHALATCPQSLLKGMNRFLERLDI
TFRRDPNNYRPRINKLNSVKDTEQKRSGNYFFLED
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaattaccgaaacccggtcacacggagcagagtaaaattactcgaatagcaata
gtgaacaatgatcgatgtaaaccaaaaaactgtggtcaagtttgtaaaaaatcttgcccg
gtggtgcgaatgggaaaattgtgtattgaagtaactccgtcgagcaaaatagcttttata
tccgaatctctttgtattggttgtggtatatgcgtgaagaaatgtccttatgacgcaatt
agtataattaatttgccgagcaatttggaaaagcacacgactcatcgatacggtccaaac
agttttaagctgcatcgattgccgacgccgaggccaggtgaaattcttggtcttgtaggt
acaaatggtattggaaaatcaacggcgttgaagattctttcgggaaaattgaaaccaaat
cttggaaaatataaagaaccaccagaatggcaagaaattttgacgtattttcgtggatct
gagctacagaattactttacgaaattattggaagacaatcttcgggcagtaataaaacca
cagtatgttgatcaaattcctcaagctgcaaaaggacttgtcagtgatatgatagcgaag
aaggatgatttgaaaaaagctgatgcaatgtgcagattattagatttggagaatgttatg
gatagaaatgtcgcagatttatccggcggagagctgcagcgttttgccattgctgttgtt
tgtattcaacgtgcagacatatacatgtttgatgaaccatcgagttatttggatgtgaag
cagcgtttgaaagctgcagtggcggtgcgctctctggtgcattctgataatttttccatt
gttgttgaacacgatttgtcagttctcgattatttgtcagattttatctgtgttctttat
ggtgtacctggcgcttatggagttgtgacaatgccattttctgtacgagaaggaatcaat
atatttttagatggctttgttccaacagaaaatttacgatttcgagaaacatcattaagt
tttaaatatccatctatgaagaaatctttgggtagttttgaattgaccgttgaagcaggc
aacttttcggattcagaaattattgttctattgggtgagaatggtactggaaaaacgacc
atgattcgaatgcttgctggaagattggagccagacgtgaatgcgggtgaaataccacaa
ttgaacatttcatacaagcctcaaaagatcagcccgaagtcgaattgtaaagtttcagag
ttgttgcgttcgaaaattccagatacgtttgtgcatccccagtttgttgctgaagtgttg
aaaccgttaaatattgaagatatattggatcaagacgtgcaaaatttgtctggtggcgaa
ttgcagcgtgttgcattggtgttgtgcttgggaaagtcggcagatgtgtatctcattgac
gaaccgcatattttgaacgcgaagaagacggcatttattgttgaacacgactttatcatg
gcaacatatcttgccgatcgtgttattgtttttgaaggagaaccttcaaaacatgcctta
gctacatgtccacagagtttgcttaaaggaatgaatcgatttttggagcggttggacatc
acttttcgaagagatccgaacaattaccgtcctcgcatcaataagttgaattctgttaaa
gatactgagcagaagagatctggaaattatttctttttggaagattaa
DBGET
integrated database retrieval system
