Trichinella spiralis: Tsp_12528
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Entry
Tsp_12528 CDS
T01609
Name
(RefSeq) putative histone deacetylase family protein
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_12528
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
Tsp_12528
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
Tsp_12528
HDAC complexes
SMART complex
Tsp_12528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
10899962
NCBI-ProteinID:
XP_003367453
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MSKASGFCYINDIVLAILELLKYYPRVLYVDIDVHHGDGVQEAFIQSDRVLTFSSHQFSE
GFFPGTGLPDEIGIGPGKYFAVNIPLKEGATLATFEQAVKPLLRLAVESFLPSVIVLQCG
ADSLACDRLGHFSLGIEDHGVCVSFVRDFNLPMLVVGGGGYTLKNVARCWAYETSLLVRK
DVPNHIPLTCEYREMFKPKYLLRPELKKHYENQNHASYLNLIREVVSCHLRRVAISPSVA
LRPLGQSENVTNVFRLPENYNFNSNNQQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagcttccggcttttgctacataaacgacattgttcttgccatattggaactg
ttgaagtattatcctcgagtgttgtacgtggatattgatgtccatcatggggatggtgtc
caagaagcgtttatacaaagtgatcgcgtgttgacattttcatcgcaccaattttccgaa
ggattcttccctggcactggtttgccggatgaaatcggcattggaccaggcaaatatttt
gccgtaaatattccactgaaagaaggcgccacgttggccacgtttgaacaagcggtgaag
ccgttgttgcgtctggctgtggaaagctttctaccttctgttattgtgctacaatgtgga
gctgattcgttggcttgtgaccggttgggtcatttttctttgggtatcgaagatcacgga
gtatgtgttagttttgtcagagatttcaatttgcctatgctggtcgtcgggggcggtggc
tatactttgaaaaatgttgcccgctgttgggcgtacgaaacgtcccttttggttcgcaaa
gacgtgcccaaccacattccactgacctgcgagtatcgtgaaatgttcaagccgaaatat
ttgcttcgtcctgaattgaaaaagcattatgaaaatcaaaaccacgcctcgtatttgaat
ttaattcgagaagtggtcagttgtcacttgcgaagagtcgccatttcgcccagtgtagct
ctgagaccgctcggtcagtctgaaaatgtcaccaacgttttccgactccctgaaaattat
aattttaactcgaacaaccaacaataa
DBGET
integrated database retrieval system
