KEGG   Trichinella spiralis: Tsp_12651
Entry
Tsp_12651         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K11274  chromosome transmission fidelity protein 4
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tsp03036]
    Tsp_12651
Chromosome and associated proteins [BR:tsp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    Tsp_12651
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_ELP1_1st Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 10903371
NCBI-ProteinID: XP_003380933
LinkDB
Position
Unknown
AA seq 669 aa
MASLVPFRFGHISGIVSLSLNSEERLIISAGEDGQIRAWKDFEQEETRTYDITECITAVA
CSGNRAFVATETNTVNEYNLLNGEFVCTVTRCSLPITRIVVSPTEILFMFYSDFTVKYVN
VEDKSFTSLEGHGGPVLSVAVDSSETYAATSSCDSCVKIWRLSDSQCMKSLPILKSSSEF
SLSDPMLKIDWSPNSSELLAVPSENVVKLYTRESWNLKSELQCENVTSPCSICVFDPSGK
MLAAAYMDGSLCIYDVVTSTCLFKETTSKTMADMIWNTFEQDSLLLADIEGCVGVWKNLN
STAANEKDTETALSVGRKIAIIDDEDSKDFDLGAIKSQFMTQLSEDAGTPAGGGGGGTAV
FSEEQMLHIFKKWAKSTELKPFASASTPLNHQKRYMKWNAFGVVKQISGELDGIDVEFHD
PSVHHSLHFDNAVTEFFAGDLSDEAIAFASAKTATNNSQIFVAHFASWDASKEWSADLPE
SESVECLCIGKGWVAFVSNKLLLRVYTLSGFPLWTSCLNGSIVTMTARGERLAVVYKEGT
TFIGQQASLRCSLYALNWSTESVGDKIQLLGTYAVALSAGATLTWLVTEKGNCCTADSKG
TVRILSGGIWLLACDLTKAVTQFTGMEEAYHVYDHLWPVDVLESSCEVLCVPCNKSLYPA
FAPKPVMVQ
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcatcgcttgttccatttcgttttggccatatttctggaatagtgagtttatcgctg
aattctgaagaacggttgataatcagcgctggtgaagatggtcaaattcgagcgtggaaa
gacttcgaacaggaagaaacaagaacatacgatattactgaatgtatcactgccgttgct
tgttcaggaaatcgtgcttttgtcgcaactgaaacgaataccgtaaacgaatacaattta
cttaatggagagttcgtatgcaccgtgactcgttgttctcttccaattaccagaatcgtc
gtttcacccacagaaattttgttcatgttttacagtgatttcacggtaaagtatgttaat
gtggaggacaagtcattcacttctctggaagggcacggtggccctgtgctcagtgtcgcg
gtggattcatcggaaacatacgccgctacatcttcgtgtgatagctgcgtgaaaatatgg
cgactttcggatagccagtgcatgaaatccttgccaatattgaaaagttcttccgaattc
agcttgtcagatccaatgcttaaaatagactggtcaccaaattccagcgaactcttggcc
gttccatctgaaaatgtggtcaaactgtacaccagagaatcttggaatctgaaatcggag
ttgcaatgtgaaaatgtaacaagtccgtgtagtatctgcgtgtttgatccgagcgggaaa
atgctagcggcggcttacatggatggttcattgtgtatatacgatgtcgttacgtcgact
tgccttttcaaagaaactacatcgaaaactatggccgatatgatttggaatacatttgaa
caagactcgttgttgctggcagatatagaaggttgcgttggtgtgtggaaaaatttgaac
agtacagcagcgaatgaaaaagatacagaaacagctttatcagttggtcgtaaaattgct
ataattgacgacgaggattccaaagatttcgatcttggagcaataaaatctcaatttatg
acgcagttgagcgaagatgccggtacacctgctggtggtggtggtggtggaacagcagtg
ttttctgaagagcaaatgttgcatatttttaaaaagtgggcaaaatcgacagaactgaaa
ccgtttgcctctgcttctacacctctcaatcatcagaaacgctatatgaaatggaatgcc
ttcggagtggtgaaacaaatttccggtgaactggacggtatagatgtcgaatttcacgat
ccgtctgttcatcattctctccattttgataatgcagttacggaattttttgccggagat
ctatccgatgaagcgatagcattcgcctctgcgaaaacagccacaaataacagtcaaatt
ttcgtcgctcatttcgcttcttgggatgcttcgaaagaatggtcggcagatttacctgaa
tcagaaagtgttgaatgtttgtgcattggcaaaggttgggttgcgtttgtgtccaacaaa
ttgctgttgcgtgtctacacgttgtctggtttcccgttgtggactagctgtttaaatggt
tccatagttaccatgactgcaagaggtgaacgactggccgtcgtttacaaagaaggaaca
actttcatcggtcaacaagcatcgttacgttgttccttgtacgctctcaactggtctacc
gaaagtgtaggagacaagatccaactgctcggaacttatgcagtggcgttgagcgctgga
gccactcttacttggctcgtgacagagaaaggaaattgttgcacagctgattcgaagggt
acagtgcgcattttatccggtggtatttggctgttagcttgtgatttaacaaaagcggta
acacaatttactggcatggaagaagcttaccacgtttacgaccatttgtggccagtagat
gtattggaatcgtcgtgtgaagtgctctgcgtcccttgcaacaagtcgttgtatccagct
tttgctccgaagcctgtgatggttcaa

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