Trichinella spiralis: Tsp_12801
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Entry
Tsp_12801 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
tsp
Trichinella spiralis
Pathway
tsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Tsp_12801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_12801
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Tsp_12801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp14
Dynamin_N
Peptidase_M17
Motif
Other DBs
NCBI-GeneID:
10910919
NCBI-ProteinID:
XP_003368506
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MDKLKRFRALVSYQERKYRRLKRIKSKAFHRLRKKTEKKRLINELEQLIHSDPAAAAEKF
QQLERDRIIERATLRHRGTGTWSKRMKGLSKNDPEMRQMLQEQIRKAKELVVKLGYAHEL
AKSEDEEDNLYGDAMDVEDVCSPHQSSQTPGKVMLDLTPKVAPEILEDRIDLGEQEALIS
EAFMEDDVVAEFDAEESSDDESNAANLSSMPGWNSWTGPGIVEKRSKSLNAGVENEKEKQ
PNKEKQLVYICQEADKQLRSKQIKKVPFPFSKSAAFEETLKQPIGKEWNPETAHKLIVEP
VVSTKMGMPIYPIDRTFLERQLDDDFRESSNVEGNKRNKKKKMMKQKVHAKDARKKLKPK
MTKNKAYTMAWINQGMQQLIPLVNQLQDAFNKLGVSLALDLPQIAVVGGQSAGKSSVLEA
FVGK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttgaaacggttcagagctctggtgtcataccaggagaggaaatatcgacgg
ctgaagcgcataaaaagtaaagcttttcatcggttgcgcaagaaaaccgaaaaaaagcgc
ctaatcaacgaattggagcagttaattcactctgatccggcagctgcggcggaaaaattc
caacaactcgaacgcgatcgaataatcgaacgcgcaacccttcgtcaccgtggtacggga
acctggtcgaaacggatgaaaggtttgtccaagaatgatccagagatgcgtcagatgttg
caggagcagattcgaaaagctaaagaacttgtggtgaagcttggatacgcgcacgagttg
gcgaagagcgaagacgaagaggataatttatacggagatgcaatggatgttgaagacgtt
tgttcaccgcatcaaagttcccagacgcccggcaaagtgatgctggatttgacaccgaaa
gttgctccggaaattttagaagatcgcattgatttgggcgaacaggaagccctcatttca
gaagcatttatggaagatgatgtagtggctgaatttgatgcggaagaatcaagtgacgat
gaatcaaacgctgctaacttgtcatcgatgcccggctggaacagttggacaggtccgggc
attgttgagaagcgaagcaaatctttgaatgcgggtgtagaaaatgagaaggaaaagcaa
ccaaataaggaaaagcagttggtttacatctgccaagaagcggacaagcagttgcgctca
aagcagattaaaaaggttccatttccattttcaaaatcggctgcttttgaagaaactttg
aaacaaccaattggaaaagaatggaatccagaaacagcgcataaattaattgttgaacct
gtggtttctacgaaaatgggcatgccaatttatccaattgatcgaacatttttggaaaga
caattggatgatgactttcgtgaaagctctaatgttgaagggaataaaagaaacaagaag
aagaagatgatgaagcagaaagttcatgctaaggatgcgaggaaaaagttgaaaccgaag
atgacgaaaaacaaagcatatacaatggcttggattaatcaaggtatgcagcagttaatt
ccgctggttaatcaactccaagatgctttcaacaaacttggagtatcacttgcacttgat
ttgccgcagattgctgtcgtaggtggtcaaagtgctggaaaatcaagtgttctagaagca
tttgttggaaagtga
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