Trichinella spiralis: Tsp_12832
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Entry
Tsp_12832 CDS
T01609
Name
(RefSeq) E3 ubiquitin-protein ligase sia-1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tsp
Trichinella spiralis
Pathway
tsp04120
Ubiquitin mediated proteolysis
tsp04137
Mitophagy - animal
tsp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Tsp_12832
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
Tsp_12832
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
Tsp_12832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_12832
Enzymes [BR:
tsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Tsp_12832
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
Tsp_12832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_RING
Sina_ZnF
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
10899690
NCBI-ProteinID:
XP_003367560
LinkDB
All DBs
Position
Unknown
AA seq
193 aa
AA seq
DB search
MWMVTLELCEIMKVPILGVLQYLMKAIAHVPQNSCTAEVLSVFECPVCLDYMLPPYLQCQ
SGHLVCGNCRPKLTCCPTCRGPVPSVRNLVMEKIANSVLFPCKFSSNGCPAAMLYQEKVE
HEEACEFRLELSSVRRRLCWEATPRSIHEGVANAISQSDCLAFDTNTAQLFADSGNLGIN
VTITMVPPYIMNN
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgtggatggttacacttgaactttgcgaaatcatgaaagtgcctatccttggagtcttg
caatatctcatgaaggcgattgcccatgtacctcagaattcatgcactgcagaagtttta
tcggtttttgaatgtcctgtttgtcttgattacatgctgccaccttacttacaatgtcaa
agtggccaccttgtttgtggcaattgtcgtcccaaactaacatgttgtccaacatgtcga
gggccagtgccttcagtaagaaacttggtgatggaaaaaatagcaaactccgtacttttt
ccttgtaaattttcatctaatggttgtccagcggctatgctttatcaggagaaagtggaa
catgaagaagcatgtgaatttcgtttggaattgtcatctgttcgtcgacggttgtgctgg
gaagctacaccaagaagtattcacgaaggtgtagcaaatgctatatcgcagtctgattgt
ttggcttttgacaccaatacggctcaactgtttgctgacagtggtaatcttggtattaat
gtaacaataaccatggttccgccgtacattatgaataattga
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