Trichinella spiralis: Tsp_12977
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Entry
Tsp_12977 CDS
T01609
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_12977
Spliceosome [BR:
tsp03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
Tsp_12977
Other components
Complex C specific factors
Tsp_12977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP_N
G-patch
G-patch_2
DUF1319
HopW1-1
DUF7367
Motif
Other DBs
NCBI-GeneID:
10898761
NCBI-ProteinID:
XP_003366553
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MDDEFESFEINENDLDSAFNPFKRRYISKNQQIYGVWADLSDSDRDEDDYDRPSTSRKRK
DYMKEVKFVSGGVKKGEKISKEEKDDAFDLSISPDDSDNDGRTEITSVKSGGGSSAAAFT
HRYYNASKKFNNQMIAGLRDTGPTGQRFGDWERHTKGIGWKLLKKMGYEPGKGLGKQSQG
IAEPVKAVVRPGRGAIGAYGREGNKLLESEDVKVEKEVLDFGNYKKKQQFKRTVTSERTS
HDKATRIVYRTWDEVVQEGGTLKRHWGSSGSASTKIIDMTGTEQKVYDSYELYATKKQSD
AYRSDRTNFDLPELLHNVDLIIHTAEESILRTDRQMKTITDQNQSLEHECNMLQNCLNSD
AQEMQRLEKLDSALDAFGLLVDAGEVSTQDCMRLFKKLQSEFPDEYK
NT seq
1223 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaatttgaatcatttgaaattaatgaaaacgatttggattcagcatttaat
ccgttcaaacgaaggtatatttcgaaaaatcagcaaatttacggcgtttgggccgatcta
tcggatagcgatcgagatgaggatgattatgatcgtccttcgacctcaaggaaacgtaaa
gattacatgaaagaagtgaaatttgtctctggtggagtgaaaaagggagagaaaatatcg
aaagaggaaaaagatgatgcattcgatttgtcaatttctccggatgacagtgataatgat
ggacgaactgagataacgtctgtgaaaagtggtggtggtagctctgctgctgcttttact
catcgttattataatgcttcgaaaaagtttaacaatcaaatgattgctggcttgcgtgat
actggacccactggacagcgttttggcgactgggaaaggcacacgaaaggtattggctgg
aaattgttgaaaaagatgggttacgagcccggaaaaggtcttggcaaacaaagtcaaggt
attgccgaaccagtgaaagctgtagtcagaccgggtcgtggtgccattggagcctacgga
cgcgaaggtaacaaattattggaatctgaagatgtgaaagtggaaaaggaagttttggac
tttggaaattataaaaagaagcagcagtttaagagaaccgtcacatcggagaggacatca
cacgacaaagctacacgtatcgtctacaggacttgggacgaggtggttcaagaaggtgga
acgttgaagcgccactgggggtcatcgggcagcgcgtcgaccaaaattatcgacatgacc
ggcaccgagcagaaggtttacgacagttatgaactgtatgcgacgaagaagcaaagcgat
gcgtaccgttcggacagaaccaatttcgatcttcctgaattgttgcacaacgtggatttg
ataattcacacggccgaagagtcgatcttgcggaccgacagacagatgaagacgatcact
gatcagaaccaatctttggaacacgagtgcaatatgttgcagaactgtttgaacagtgac
gcacaagagatgcagcgtttggagaagttggactcggctttggatgcattcggcttgttg
gttgacgctggcgaggtgtcgacccaagattgcatgcgcttgttcaagaagttgcagtcc
gaatttcccgacgagtacaagtt
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