Trichinella spiralis: Tsp_12984
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Entry
Tsp_12984 CDS
T01609
Name
(RefSeq) vacuolar protein sorting-associated protein 52-like protein
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_12984
Membrane trafficking [BR:
tsp04131
]
Protein recycling
Others
EARP complex
Tsp_12984
Endosome - Golgi transport
Tethering complex
GARP complex
Tsp_12984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_CC
Sec3_CC
COG6_N
DUF4481
DUF1664
Baculo_PEP_C
Cluap1
Dor1
VPS51_Exo84_N
Sec8_N
SHE3
BORCS7
HIP1_clath_bdg
Fez1
Med2
THOC7
T4_gp9_10_C
Motif
Other DBs
NCBI-GeneID:
10899750
NCBI-ProteinID:
XP_003366213
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MRCNDDDNDYGIVAGCGRTMSTNVVVDHPNEDVVEMLNANSMEQWKKDPSAGDVAEIEVT
VQNVNPLAASSEQQDVSNRPTTTTIGTPLGRVIIIIVVVIQKLENIFENGITIVVVMPLK
LTCKVLSFTKFDPNHVPRAILSSKLSITVEDYVTAMELLTNDFRFRLYTVFHQRIIFAWL
IASLIVMFCVLFSNARGLVLFALSLGWSSVIGLGTLLCVIFERMLDQSLSACVATVNRFL
VRHNLLLCVDDRGKFSCHKIAILEVAKNVEKLGLKLHRRQHHLPIPTTPSVSSQVDIVAA
PTTAQNKHTQRYCRDLIRQGINLPVVRFQDQTDDMSITVKHCKFALCLCQYLEKCHFQKR
RRSLFCWSLCVLFVNFQKIMSTEKDNPDAGIISDKTTAVDGELLSEILGMGIDLREYAKD
VQKQLKSVEADAIQEFVEQAENIATLHNEIRNCDQILNQMESMLTAFQSDLGNISNEIQS
LQEQSVKMSVKLKNRQAVRGELSQFIDEIVVPEVMIKTIIDEPVSERLFLEQLHELQHKI
AFVKQQAFREALSCVEVEGLLENLRLKSLFTDSGNGKDQRFFAQANIPISQADGELSSHA
GHVVEIQILFRIYTFQRPLRGQRDS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcaacgacgacgacaacgactatggcattgttgctggatgtgggcgaacaatg
tcgactaatgtcgtcgttgatcatccgaacgaagatgttgtggaaatgttgaatgcaaat
tcaatggaacagtggaaaaaggatcccagtgcaggtgacgtggctgaaatcgaagtcacc
gttcaaaatgtcaatccactggccgcatcttcggaacagcaggatgtttcgaatcgacca
acgacgacgaccattggaacaccattgggtagagttattattattattgttgttgttatt
caaaaattggaaaatatatttgaaaatggcattacaattgtcgtcgttatgcctttgaaa
ctaacttgcaaagtgttgtcgtttaccaaattcgatcccaaccacgtaccacgagcgata
ctcagcagcaaattatccattactgttgaagattatgtgaccgctatggaattgttgacg
aacgattttcgttttcgtctgtacacagtatttcatcagagaatcattttcgcctggtta
attgccagcttgatagtgatgttttgtgttcttttctccaacgctcgaggtctggtgttg
ttcgcattgtctctcggctggtcgtctgtaattggacttggcacgttgctttgtgtaatt
tttgaacgaatgcttgaccaaagtctcagtgcttgtgtggcgacggtgaacagatttctc
gtacggcacaatttgctgctttgtgttgacgatcgtggcaaattttcctgtcacaaaata
gctattttggaagttgcgaaaaatgttgaaaagctcggcttgaaattgcaccgtcgacaa
catcatttacccattccaacaacgccaagcgtctcgtcgcaggtcgacatcgtcgccgca
ccgaccactgctcagaacaaacacacgcagcggtattgtcgtgatttgatcaggcagggg
atcaatttgccggtcgtcaggtttcaagaccaaaccgacgacatgtccattacggtgaag
cattgtaaatttgcattgtgtctgtgtcagtatttggaaaagtgtcattttcaaaagcgt
cgtcgttcattgttctgttggtctctgtgtgttttgtttgttaattttcaaaaaatcatg
tccactgaaaaagacaatcctgatgctggtataattagtgacaagacaactgccgtcgac
ggagaactgttatccgaaatattgggaatgggcatcgatctgcgtgaatatgcaaaagat
gttcaaaagcagctaaagtcggtcgaagcggatgcaatacaagaatttgttgaacaggcg
gaaaacattgccacgttgcacaatgaaattcgtaattgcgatcaaattttgaaccagatg
gagtcgatgttgacagcttttcagtcggatctgggcaacatcagcaacgagattcagtcg
ttgcaagagcagtcggtgaagatgagcgtcaagttgaaaaatcgacaagccgtccgaggt
gaactgagtcagtttatcgacgaaatcgtagtcccagaagtgatgatcaagacaattatc
gacgaaccggtgtcggagaggctttttcttgaacaattgcacgaattgcaacacaaaatt
gcattcgtcaagcagcaagcctttcgtgaagctctttcctgcgtcgaagtggaaggtcta
ttggaaaatctacgactgaaatctcttttcactgattcaggcaacggaaaagaccagaga
ttttttgctcaagcgaatataccaatttcgcaagccgatggcgaattatccagtcacgca
gggcacgttgttgaaatacagattctatttcgaatttatactttccaacgaccgttacgt
ggccaaagagattcgtga
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