KEGG   Trichinella spiralis: Tsp_13223
Entry
Tsp_13223         CDS       T01609                                 
Name
(RefSeq) E3 ubiquitin-protein ligase
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsp04121]
    Tsp_13223
Enzymes [BR:tsp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     Tsp_13223
Ubiquitin system [BR:tsp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    Tsp_13223
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-rbx1 Prok-RING_4 zf-Nse zf-RING_11 zf-RING_4 zf-C3HC4_4 Pellino_RING Rtf2 zf-UDP zf-RING_6 zf-RING_16 zf-ANAPC11 zf-RING_10 RING_XB3-XBAT31 zf_RING_Vps8 CEP104_ZnF zf-FLZ TRAF3_RING DUF1272 Zf_2nd_IFT121 DUF2826 zf-C3HC4_5 FYVE DZR
Other DBs
NCBI-GeneID: 10910559
NCBI-ProteinID: XP_003368623
LinkDB
Position
Unknown
AA seq 101 aa
MPPKKVKKTDEVSSDAQTSESSDKIISGEIYTCTVCMTSLREQVQARKPMVTTYCGHVFC
KQCIERTLKNEIRNCPVCRANIAPNKYIFMKYKRKKVPMEE
NT seq 306 nt   +upstreamnt  +downstreamnt
atgccaccaaagaaggtaaaaaaaaccgatgaagtttcaagtgatgcccaaactagtgaa
agttcagataaaattatttccggtgaaatttatacgtgtactgtttgcatgacttcattg
cgagagcaagtccaagcaaggaaacctatggtcaccacttattgtgggcacgtgttttgt
aagcaatgcattgaacgaactcttaagaatgaaatacgcaattgccctgtttgtcgggct
aatattgctccaaataaatatatttttatgaagtacaagcgtaaaaaagttccaatggag
gagtaa

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