KEGG   Trichinella spiralis: Tsp_13536a
Entry
Tsp_13536a        CDS       T01609                                 
Name
(RefSeq) putative LIM domain protein
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
tsp  Trichinella spiralis
Pathway
tsp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    Tsp_13536a
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tsp04990]
    Tsp_13536a
Domain-containing proteins not elsewhere classified [BR:tsp04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   Tsp_13536a
SSDB
Motif
Pfam: LIM
Other DBs
NCBI-GeneID: 10897647
NCBI-ProteinID: XP_003369835
LinkDB
Position
Unknown
AA seq 312 aa
TNRYSGSQLPTITDTQISLGSDTLLDDNNKDAEWGLDEKCLSQSDASVSLLGKEVHDAIA
GKNATSDHLKPAPRRQKSTTDYSNPFAQIDNQVVTASDIVCAHLTLYQRGGSRTVGAYVP
RRGRGVLKQIGESLRIPVCEACHREIRGPFVLALGKSWCPDHFVCSHPECRRKLLDVGFV
EEGGFIYCEFCFERYLAPSCFKCNRSIVGDCLTALDRKWHPECFCCAHCHKPFGNSCFFL
EDGKPYCEQDWNTLFTTKCCACQFPIEAGDRWVEALGNAYHSNCFTCTVCMKNLEGENFY
IKGNRPYCKAHA
NT seq 939 nt   +upstreamnt  +downstreamnt
acaaaccgatacagtggatcacaactaccgacgatcacagacacacagatctcactcgga
tcggatacactgttggacgacaacaacaaagatgctgaatggggtttggatgaaaaatgc
ctttcacaaagcgacgcgtcagtttctttgctgggcaaagaagtccacgatgcgatagcc
ggaaaaaatgcgacctcggaccacctgaaaccggcgccacggcgccagaaaagcacaacc
gattacagtaatccttttgcacaaatcgacaatcaagtagtaacagccagcgacatcgtc
tgcgcccatttgactctttaccagcgaggaggaagtagaacagttggtgcttatgtgccg
agaagagggcgtggtgtgttgaagcaaattggagaaagtctacgcatcccggtctgcgaa
gcatgccaccgtgaaataagaggtccatttgtgctggcgcttggaaaatcctggtgtccg
gatcattttgtgtgctcgcatcccgagtgtcgccgtaaactgctcgacgttggctttgtc
gaagagggcggcttcatctattgtgaattttgctttgaacgttacttagctccaagctgt
ttcaaatgcaatcgatcaattgtgggggattgtctgacggcattggaccgaaaatggcat
ccggaatgtttctgctgcgctcattgtcataaaccgtttggcaattcttgcttttttctc
gaagatggaaaaccatactgtgaacaagattggaatacacttttcacaactaaatgctgc
gcatgccaatttcctattgaagctggcgatcgatgggttgaagccctgggcaatgcgtac
cattcgaattgcttcacttgcacggtatgcatgaagaatttggaaggggaaaatttctac
attaaaggcaatcgaccatactgtaaagcgcacgcgtga

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