Telmatocola sphagniphila: KIH39_00955
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Entry
KIH39_00955 CDS
T07229
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tsph
Telmatocola sphagniphila
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsph03400
]
KIH39_00955
Enzymes [BR:
tsph01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KIH39_00955
DNA repair and recombination proteins [BR:
tsph03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KIH39_00955
Prokaryotic type
KIH39_00955
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QVL32518
UniProt:
A0A8E6B5W5
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All DBs
Position
complement(203479..205068)
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AA seq
529 aa
AA seq
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MSAFNDARIRYANQAAINPKNKYVLYWMQACRRFDRNHALDHALNLCKTLGKPLVVYEGL
RIDYPWANDRNHRFLLEGMLDNARKALELGINYWPYVETPDQPAKGLLAKLAQQACVVVT
DDYPAFVVPGHIAGLANHTNTAVQAIDGNSMIPLSLLGAAVSACAHLRPRIHKLFAEAWP
HRATANPPFEKAIATQIDPPFKIWSLAKKPNDATSEALDQFLASLPIDHSVKPVTVSGGS
VSAQKILKKFVQKKLSSYADGRNEPNDPEHTAASGLSAHLRHGHISIQQIVEEVLNSSGK
WTPEQITFSNKGKREGFYHSNPNVNSFLDEAITWRDVGYHWHHCRREKIRLINETSPAAR
ALKWKHPIYQDLESTLPAWAYQSLKKHESDSRSHIYSLDEWEAAETHDDLWNAAQTELVQ
TGRIHNYLRMLWGKKVLEWSRTPDEAYFILEHLNNKYAIDGRDPNSYTGMLWCFGLFDRP
WPPERKVFGNIRYMSSDNTAKKFDLDGYYQYMRRLGGGSSPRGKKSLFD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctttcaacgacgcccggatacggtatgccaatcaggccgcgatcaatcccaaa
aacaaatatgtcctctactggatgcaggcctgtcgccgcttcgaccgaaatcatgccctc
gatcacgcattgaatctctgcaagactctgggcaaacccctcgtggtgtacgaagggcta
cgcatcgactatccctgggctaacgatcgcaatcatcgattcctgctggaaggcatgcta
gacaatgcccgcaaggccctggagttgggtatcaactattggccgtatgtcgaaactccc
gatcagccggccaaaggacttctggccaagctggctcagcaggcttgcgttgtcgtaacc
gatgattacccggcctttgtcgtacccgggcacattgcaggtctggcgaaccataccaac
acggctgttcaagcaatagatggcaacagcatgatccccttgagcctgctcggagcggcg
gtttctgcctgcgctcatctgagaccgcgaatccacaagctctttgcggaagcgtggccg
catcgagccaccgctaaccctccgtttgaaaaagcgattgcgacacagatcgatcctcct
ttcaaaatctggagtttggctaaaaagcccaacgatgcgacctccgaagctctcgatcag
tttctggcgtcactacccatcgatcattcagtgaaaccggtaacagttagtggaggaagt
gtttcggcccagaagatcctgaagaagttcgttcaaaaaaaattaagctcttacgcggac
ggccggaacgaacccaacgatccggaacacactgccgccagtggtttgagtgcccacctg
cggcacggccatatttccattcagcagattgtcgaagaagtcttgaattcctccggaaaa
tggactcccgaacagatcactttttccaacaagggaaaacgagagggtttctatcactcg
aatcccaacgtgaacagctttctggatgaagccatcacctggcgcgacgtcggctaccac
tggcaccattgccggcgagagaagattcgtttgatcaatgagacttctccggctgcccgg
gctctgaagtggaagcatccgatttatcaggatttggaatcgaccctacccgcctgggcc
tatcagtcgttgaagaaacatgaatccgacagccgttctcatatctattccctggatgaa
tgggaagcggcggagacccacgatgatttgtggaatgctgcccagactgagttggtgcag
acggggcgaatacataattatctacgcatgctctggggcaaaaaggttttggagtggtcg
cgtacgcccgatgaagcctacttcatcctggaacacttgaataacaaatatgccattgat
ggccgagatccgaacagctataccggtatgctctggtgctttggcttattcgaccgtccc
tggccgcccgaacgaaaagtgttcggcaacattcgctacatgtcttccgacaacacggcc
aaaaagttcgatctggatggctattaccaatacatgcgtcggctcggaggaggcagttca
ccgcgtggaaagaaatccttgttcgattga
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