KEGG   Telmatocola sphagniphila: KIH39_01160
Entry
KIH39_01160       CDS       T07229                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
tsph  Telmatocola sphagniphila
Pathway
tsph03030  DNA replication
tsph03430  Mismatch repair
tsph03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tsph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KIH39_01160
   03430 Mismatch repair
    KIH39_01160
   03440 Homologous recombination
    KIH39_01160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tsph03032]
    KIH39_01160
   03400 DNA repair and recombination proteins [BR:tsph03400]
    KIH39_01160
Enzymes [BR:tsph01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KIH39_01160
DNA replication proteins [BR:tsph03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KIH39_01160
DNA repair and recombination proteins [BR:tsph03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KIH39_01160
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QVL32556
UniProt: A0A8E6B7G9
LinkDB
Position
254934..255497
AA seq 187 aa
MSLNTRFLAIDFETADNGRDSACAVGLVRFVGGEIVDRKQFLIRPPRRNILYTYIHGIKW
EHVKDQPNFAELWPLLEVEFRETDCLVAHNAGFDAAVLKGCCTTAGVPLPVTPFICTVVL
ARKAWRVYPTKLPDVCRYLDIHLKHHDALSDAEACARIVIAAQKAGRDHLIKVPSAPATP
TLAKKLF
NT seq 564 nt   +upstreamnt  +downstreamnt
atgagcctgaatacccgatttttggctatcgattttgaaacggctgataacgggcgcgat
agtgcctgtgcggttggtctggtgcggttcgtggggggagaaatcgtcgaccgcaagcag
tttttaattcggcctccccgtcgcaatatcctctacacctacattcacggcatcaaatgg
gagcacgttaaagatcaacccaattttgccgaactctggccgttactggaagtcgaattt
cgggaaaccgattgtctggtagcccataatgccggatttgatgcggcggtactcaagggc
tgctgcacgacggccggcgtacctttgccggtcacgccattcatttgcacagtcgttctg
gcccgtaaagcctggcgagtttaccccaccaagctaccggatgtttgtcggtatttggat
attcatctgaaacatcacgacgccctttctgacgccgaggcttgtgctcgaattgtcatt
gctgcgcagaaagccggtcgcgatcacctgatcaaagttcccagtgctcccgcgacaccg
accctagcgaaaaaacttttctga

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