Telmatocola sphagniphila: KIH39_01160
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Entry
KIH39_01160 CDS
T07229
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tsph
Telmatocola sphagniphila
Pathway
tsph03030
DNA replication
tsph03430
Mismatch repair
tsph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIH39_01160
03430 Mismatch repair
KIH39_01160
03440 Homologous recombination
KIH39_01160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsph03032
]
KIH39_01160
03400 DNA repair and recombination proteins [BR:
tsph03400
]
KIH39_01160
Enzymes [BR:
tsph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIH39_01160
DNA replication proteins [BR:
tsph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KIH39_01160
DNA repair and recombination proteins [BR:
tsph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KIH39_01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QVL32556
UniProt:
A0A8E6B7G9
LinkDB
All DBs
Position
254934..255497
Genome browser
AA seq
187 aa
AA seq
DB search
MSLNTRFLAIDFETADNGRDSACAVGLVRFVGGEIVDRKQFLIRPPRRNILYTYIHGIKW
EHVKDQPNFAELWPLLEVEFRETDCLVAHNAGFDAAVLKGCCTTAGVPLPVTPFICTVVL
ARKAWRVYPTKLPDVCRYLDIHLKHHDALSDAEACARIVIAAQKAGRDHLIKVPSAPATP
TLAKKLF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaatacccgatttttggctatcgattttgaaacggctgataacgggcgcgat
agtgcctgtgcggttggtctggtgcggttcgtggggggagaaatcgtcgaccgcaagcag
tttttaattcggcctccccgtcgcaatatcctctacacctacattcacggcatcaaatgg
gagcacgttaaagatcaacccaattttgccgaactctggccgttactggaagtcgaattt
cgggaaaccgattgtctggtagcccataatgccggatttgatgcggcggtactcaagggc
tgctgcacgacggccggcgtacctttgccggtcacgccattcatttgcacagtcgttctg
gcccgtaaagcctggcgagtttaccccaccaagctaccggatgtttgtcggtatttggat
attcatctgaaacatcacgacgccctttctgacgccgaggcttgtgctcgaattgtcatt
gctgcgcagaaagccggtcgcgatcacctgatcaaagttcccagtgctcccgcgacaccg
accctagcgaaaaaacttttctga
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