Telmatocola sphagniphila: KIH39_01575
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Entry
KIH39_01575 CDS
T07229
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tsph
Telmatocola sphagniphila
Pathway
tsph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KIH39_01575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsph03019
]
KIH39_01575
03009 Ribosome biogenesis [BR:
tsph03009
]
KIH39_01575
Enzymes [BR:
tsph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KIH39_01575
Messenger RNA biogenesis [BR:
tsph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KIH39_01575
Ribosome biogenesis [BR:
tsph03009
]
Prokaryotic type
rRNA helicases
KIH39_01575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QVL34816
UniProt:
A0A8E6BAL1
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All DBs
Position
346070..347302
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AA seq
410 aa
AA seq
DB search
MPEGEAGSGFQPLNLIRPLLDAVAFAGYVNPSPIQSALIPVAITGKDVIGQSQTGTGKTA
AFLIPFMNSWRGNDPRFPQALVMTPTRELAVQVAGEATKLSPSRHFRTVCCYGGQKFGLQ
MDQLRKGITLLVGTPGRIFDHLSRGTISLDHVRYVVLDEADQMLDIGFRPQIERIMRKLP
KKRQTLLLSATMPPPVMKLVQRYLVEPEHINITPETPTVDKITQKYFTVDEHNKFDLLLK
VLDREKPRQCIIFVERKRSADRLYKDLQKHLPGVNVTHGDLEQKKRERIMADFRSAKITT
LIATNVMSRGIDVKGISHIINYDLPQDLESYVHRIGRTGRMGRDGKAISFVTPEQGSMLT
GIELMINRLIEEDHFEDFEAWTPRATTEAEAPKASKPVFGRSNKKYSNRL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgccggagggagaagcagggagtggttttcaacccctgaacttaattcgacctctgctc
gacgccgtggcttttgcaggctacgtgaatccatcgcctatacagagcgcgctaattccc
gtggctatcactggcaaagatgtcattggccagtcgcaaaccggcaccgggaagacagcg
gcttttctgattccgttcatgaatagctggcgaggcaacgacccgcgctttccgcaagcc
ctggtgatgactcccacgcgcgaattggcggtacaagtggccggggaggcaaccaagctc
tctcccagtcggcatttccgaaccgtctgttgctacggcgggcaaaaattcggcctgcag
atggatcagttgcgtaagggcatcacgcttctagtcggtactccgggacgaatattcgat
cacctcagccgcggaacgatttctctggatcacgttcgctatgtcgtgctggatgaagcc
gaccagatgctcgacatcggctttcgaccgcagatcgaacggatcatgcggaaattgccc
aagaaacgacagacgctgttgctatccgcgacgatgccgcctccagttatgaagctggtg
cagcgctacctcgtggaaccggaacatatcaatatcacccccgaaacgcccacggtcgac
aagattacgcagaagtatttcacggtggacgaacacaacaagttcgatctgctgttgaag
gttctggaccgcgagaagccccggcaatgcatcatcttcgtcgagcgcaagcgcagtgcg
gaccgactttacaaagatctgcaaaagcaccttccgggggtcaacgtcacccacggcgat
ctggaacagaagaagcgcgaacggattatggccgatttccgatcggccaagatcaccacg
ctcattgccaccaatgtgatgagtcgcggcatcgatgtgaagggcatttcgcacatcatc
aactacgatttgccccaggatctggaaagttacgtgcaccggatcggccgtacggggcgt
atgggccgcgatggcaaagcgatctcctttgtaacccccgagcaggggagcatgctgacc
ggcatcgagttgatgatcaaccggctgatcgaagaagaccactttgaggatttcgaggcc
tggacgcctcgagccactaccgaagctgaagctcccaaagcttcaaaaccggtattcggc
cgctcgaacaagaaatatagcaatcgactctaa
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