| Entry |
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| Name |
(GenBank) helicase-associated domain-containing protein
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| KO |
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| Organism |
tsph Telmatocola sphagniphila
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tsph00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KIH39_03615
09124 Replication and repair
03420 Nucleotide excision repair
KIH39_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:tsph03021]
KIH39_03615
03400 DNA repair and recombination proteins [BR:tsph03400]
KIH39_03615
Enzymes [BR:tsph01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KIH39_03615
Transcription machinery [BR:tsph03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KIH39_03615
DNA repair and recombination proteins [BR:tsph03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KIH39_03615
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
839877..841619
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| AA seq |
580 aa
MPKKLTAEPSRSAAVQFDPTNPMIVQADRTILMEVNNPKYSAARDALAPFAELEKSPEHI
HTYRISNLSLWNAAAAGLSAPEMVEVLRQFTKFPLPLNVPTDIEEVVSRYGRIKLVKHDE
SHLKLICEDKPLLEEITRQPKVRQYLGERVDSVSFLVDSAHRGIIKLALNQIGYPAEDVA
GYVEGTPMEVDIIPVMKSGLPFTVRDYQRESADTFYAGGAARGGSGVIVLPCGAGKTIVG
IVAMSLVKRSTLVLTTSITAVKQWHREILDKTNLRDNQISEYTGETKEINEVTIATYQIV
TYRPDKDEDFPHFKLFEERDWGLIIYDEVHLLPAPVFRVTAQIQARRRLGLTATLVREDG
REGDVFSLIGPKKYDVPWRELEQKGWIATASCTEIRIALPESVRMEYAVAEWRDKYRIAS
ENPAKLDICDILLQRYKEQRVLIIGQYLKQLRDISKRFEIPIITGQTPNGEREELYRKFR
FGEQRHLVLSKVGNFAIDLPDANVLIQVSGTFGSRQEEAQRLGRILRPKTNGEDAHFYSI
VTRDTRELDFAQHRQLFLTEQGYSYEIKDAAEMMVTDSPG |
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| NT seq |
1743 nt +upstreamnt +downstreamnt
atgccgaagaaactgaccgccgaaccgtcccgttccgccgctgtgcaattcgatccgaca
aatccgatgatcgtgcaggcggatcgaacgatattaatggaggtcaataatcccaaatat
tcagcggcccgggatgccctggccccttttgccgagctcgagaaaagccccgaacacatt
cacacctaccgaatttccaatctttcgctctggaatgcggccgcggcgggattaagcgcg
ccggaaatggtcgaagttcttcggcaattcaccaagtttcccctccccttaaacgtcccg
acagacattgaagaagtcgtcagccggtacggccgcattaaactggtaaagcacgatgaa
agccatctgaagctgatctgcgaagataagccattgctagaggaaatcactcgccagccc
aaagtccgccagtatctcggagaacgggtagattcggtcagtttcctggtagattcggcg
catcgcgggatcatcaagctggctttgaaccagatcggctatcccgccgaggatgttgca
ggttacgtcgaaggcacccccatggaggtcgatatcatcccggtgatgaaatcggggctg
ccttttacggttcgcgattaccagcgagaatcggccgatactttttacgccggcggtgca
gcccgaggcggcagcggcgtgattgttctcccctgcggtgcgggcaaaacgattgtcggc
atcgtggccatgagtctggtaaaaagatccacgctcgtactgacgaccagtatcacggcc
gtgaagcaatggcaccgggaaatcctggataaaaccaacctccgggataatcaaatcagc
gaatacactggtgaaaccaaggaaatcaatgaggtgacgatcgcgacctaccagatcgtt
acttatcgacccgataaagatgaagacttcccgcacttcaagctgttcgaagagcgagac
tggggcctgatcatctatgacgaagtccacttgctccccgccccggttttccgggtgacg
gcgcaaattcaggctcgacgtcggctgggtctgacagccactctggtgcgggaggatggt
cgggaaggggatgttttcagtctcatcggccccaaaaaatacgatgtcccctggcgggaa
ctggaacagaagggctggatagccacggccagttgtaccgaaatccgcattgcgctgccg
gaatcggtgcgcatggaatatgccgtagccgagtggcgcgacaaataccgcatagccagc
gaaaatccggcaaaactggatatctgcgacatcttactgcagcgatataaggaacagcgg
gttctgatcatcggccagtatctcaagcagctgcgcgatatcagtaagcgcttcgagatt
cccatcatcaccgggcagacccccaacggcgagcgggaagaactctatcgcaaattccgt
ttcggcgagcagcggcacctcgtcctctcgaaagtcggcaactttgccatcgacctgccc
gacgccaatgtcttgattcaagtttccggaactttcggctcccggcaggaggaagcccag
cgactcgggcgaattctccgacccaagaccaacggggaggatgctcatttttattccatc
gtaacccgggatactcgcgagctggattttgcccagcatcgccagctttttttgacggag
caaggctacagctacgaaatcaaggacgccgccgagatgatggttacggatagcccgggt
taa |
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