Telmatocola sphagniphila: KIH39_05690
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Entry
KIH39_05690 CDS
T07229
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
tsph
Telmatocola sphagniphila
Pathway
tsph02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KIH39_05690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsph03021
]
KIH39_05690
Transcription machinery [BR:
tsph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KIH39_05690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_28
HTH_11
HTH_17
MerR_1
HTH_3
DUF3853
RH_dom
Motif
Other DBs
NCBI-ProteinID:
QVL33405
UniProt:
A0A8E6B781
LinkDB
All DBs
Position
complement(1355606..1357264)
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AA seq
552 aa
AA seq
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MNTFKHSELEALADQQVRYAPVERRHEQLIEAQKLLGEVKLGSTYPYAYVCFRITGYRSK
THADLLIEGIELQNDLHLIVRMLERSIPALPIEEAREPMLTLEEISRKFNVSTKTISRWR
VRGLVGNRVIMNGRRQLAFPQSIVESFLNQHQDRVARSSRFSHLTTSEKDKILHNARRFA
RAGASLTETSRRIARQLGRSVEAIRYTIRNFDQENPPLAIFLKPVGVAMTEDTTQERKGI
AMNTLAKKYGRERNPQFKDKNEVRAESLLKTPVDYIYNADFDDSTKENEILASMPGEEKF
QADRKSMKAPKDVPAELASLYEWPLLSREQEAHQFRLMNFLKHKLHKLRQSINPDQPRVK
EMRQVEELRLKIQDVKNRLINCNMRLVASIAKKHSLQGESLFELISDGNVSLLRAVEKFD
YGRGNKFSTYASWAIMKNYARSIPEEKKQREHYLTGAEDVFEARADVRSDEQELLAQAET
ARSKINILLDGLDPRTREVIKMRNGLDGSAEMTLEQIGKLFGITKERVRQINVRGMKQLR
ERALTHSVEIPA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgaataccttcaagcattcagaattggaagctttggcggaccagcaggtgcgatacgct
cccgtggaacgccgtcatgagcagttgattgaggcgcaaaagcttctgggagaagtgaaa
cttgggtcgacctacccttatgcgtacgtctgctttcgaatcactggttaccggtctaaa
acccatgcggatttgctcatcgaaggtatcgagcttcagaacgatcttcatctgatcgtc
cgcatgctcgaaagatcgattcccgcgcttccgattgaagaagcccgggaaccgatgctc
acgctggaagaaatcagcagaaaatttaatgtatccacgaagacgatcagtcgatggcgg
gttcgtggactagttggcaatcgggtgatcatgaatggtcgccgacagttggctttcccg
caatcgatcgtcgaatcgtttttgaatcaacaccaggatcgcgtggcaaggagtagcaga
ttttctcatctgactacgtcggagaaagacaagattctccacaatgcccgacgatttgcc
cgggccggcgcatcgctcacggaaacgagccgccgaattgcccggcagttaggaagatcg
gtcgaagctatccggtataccattcggaacttcgatcaggagaaccccccgctggctatt
ttcctcaaaccagttggggttgcgatgactgaggataccacacaggaacggaaggggatc
gccatgaacacccttgcgaagaaatacggtcgggagcggaatccgcagttcaaagataag
aatgaagtgcgagccgagtctctgctcaagacaccggtcgattacatatacaatgccgac
ttcgatgactcgacgaaggaaaacgaaatcctggcgtccatgccgggggaagaaaaattc
caggccgaccgcaagagcatgaaagctcccaaagacgttcctgccgaacttgcttccctg
tacgaatggccgctgttaagccgggagcaggaagctcatcagttccgactgatgaatttc
ctgaaacacaagctgcataagctgcgacagtcgatcaatccggatcaaccccgcgtcaaa
gaaatgcggcaggtggaagaactccgcctgaaaattcaggatgtgaagaatcgactgatc
aattgcaatatgcggttggtggcctccattgccaaaaaacactccctgcaaggggaaagc
ctgttcgaacttatttcggacgggaatgtatctttgctccgtgccgttgaaaaattcgac
tacggacgaggtaataaattcagtacctatgccagttgggccataatgaaaaattatgcc
cgtagcattcccgaagaaaagaagcagcgtgagcattacctcacgggtgcggaagatgtc
ttcgaagctcgcgccgacgttcgttcggacgaacaggaattgctggcccaggcggaaact
gctcgcagcaagatcaatatcctgctcgatggtctcgaccctcgaacgcgggaagtgatt
aagatgcgaaacggtctcgacgggtccgcggaaatgaccctcgaacagattggcaagctc
tttggaattaccaaagaacgcgttcgccagatcaacgttcggggtatgaagcagcttcga
gaacgggcactgacccacagtgtggagattcccgcttaa
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