Telmatocola sphagniphila: KIH39_13890
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Entry
KIH39_13890 CDS
T07229
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tsph
Telmatocola sphagniphila
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsph03009
]
KIH39_13890 (rimO)
Enzymes [BR:
tsph01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KIH39_13890 (rimO)
Ribosome biogenesis [BR:
tsph03009
]
Prokaryotic type
ribosomal protein modification factors
KIH39_13890 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
FlgO
RNase_II_C_S1
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
QVL29961
UniProt:
A0A8E6B2N6
LinkDB
All DBs
Position
complement(3520211..3521578)
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AA seq
455 aa
AA seq
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MSVSLPTTEKSFAFVSLGCPKNLVDSERMLGKLAQDGYALQPDANGASVVVINTCGFIES
ARQESLSVIREMLDLKKQGKVGSVVVAGCLAERQKDMLLQEVPEVDQIVGVFGREEIVQA
VDRAVEHQQEQRAWFKPAPVRALNDTARLRITPRHYAYLKISEGCDRLCTFCAIPKMRGK
HATKPMEEVLAEARELAADGVRELLIVAQDSTYYGMDLYGEVRFAQLLRELNKVDGLEWI
RVLYAYPEHITSELLKTLSSSEKVIPYIDMPLQHINDRVLKRMQRRVNRASTEKLIGQLR
KEIPLLNFRTTFIVGFPGETEAEFEELRNFVKDMAFERAGVFTYSFEPDTPAVKLDGHMP
EEVKQDRYNRLMETQQAVAFAWSERQTGREIEVIIDGADPEVPNHWLARSHADAPEIDGM
VRVKGKNLRSGDIVQVKVTAADGYDLAARAVGTPR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtttctctgcctactaccgaaaagtcttttgctttcgtttcgctgggttgcccc
aaaaatctcgtcgacagcgagcgcatgctgggaaaactcgcccaggatggctatgctctg
cagccagatgcgaatggggcgagcgttgttgtgatcaacacttgcggcttcatcgaatca
gcccgtcaggaatcactaagtgtcatccgcgagatgcttgatctcaagaagcaggggaaa
gtcggctcggtggtggttgccgggtgcctcgctgagcggcagaaggatatgcttctgcaa
gaagttccggaggtcgatcagatcgtcggcgtcttcggccgggaagagatcgttcaagcg
gtcgatcgtgccgtagagcaccaacaggaacagcgggcctggttcaaaccggcccctgtc
cgagcactgaatgacacggcccggcttcgcatcactccccgccattacgcttacctgaaa
atctccgaagggtgcgatcggctttgcacattctgtgcgattcccaagatgcggggtaag
cacgctaccaaaccgatggaggaagttctggcggaagcccgcgaactggcggcggatggg
gtgcgggaactgctgatcgtcgcccaggatagtacctattacggcatggatctctacggc
gaagtgcgattcgcgcagttattgcgggaattaaacaaagtcgacggtcttgagtggatc
cgtgtgctctacgcctatcccgagcatatcaccagcgaattgctgaagacactttcgagt
tcggaaaaagtgattccttatatcgacatgccgttgcagcacatcaacgaccgagtttta
aaacggatgcagcgccgggtaaatcgagcttccaccgaaaagctgatcggtcagctgcgc
aaagaaattcccttactgaactttcggaccaccttcatcgtcggtttccccggcgaaacc
gaggcggaatttgaagagctcagaaatttcgtaaaggatatggctttcgaacgggcgggc
gttttcacctattctttcgaacccgacacgcccgccgtcaaactcgatgggcatatgcct
gaagaagtgaaacaggatcgctacaatcgcctgatggaaactcagcaagctgtggctttc
gcgtggagcgaacggcagaccggtcgggaaatcgaagtgattatcgatggggcagatccc
gaagttccgaatcactggctggctcgcagccatgccgatgcgccggagattgatggcatg
gttcgtgtgaagggcaaaaaccttcgttccggcgatatcgtccaggtgaaagtcacggcc
gcggatggttacgatctggcagcacgggcagtgggaactccccggtaa
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