Telmatocola sphagniphila: KIH39_15810
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Entry
KIH39_15810 CDS
T07229
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsph
Telmatocola sphagniphila
Pathway
tsph03420
Nucleotide excision repair
tsph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KIH39_15810
03430 Mismatch repair
KIH39_15810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsph03400
]
KIH39_15810
Enzymes [BR:
tsph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KIH39_15810
DNA repair and recombination proteins [BR:
tsph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KIH39_15810
MMR (mismatch excision repair)
Other MMR factors
KIH39_15810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
TPR_2
NPHP3_N
TPR_1
Motif
Other DBs
NCBI-ProteinID:
QVL30318
UniProt:
A0A8E6B4E0
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All DBs
Position
complement(3972808..3974250)
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AA seq
480 aa
AA seq
DB search
MRFPTVEQQAVIDNKNGSRIRVVRASPGSGKTWMVAELILRELNSWQTQTSGIAALSFTK
VGGEEIRKAVGRDLSHPHFVGTIDSFLFRYVIRPFFCKCYPIFRHPRLLPGEWGAEHWSS
LGKGLKANVGKGINLCSCVWIDEDCQGAIAARKPHPMQPLIKLTGDDLRIVKECKNNVWK
KSGLMTHSDAALWASKLLEDEKYKALIITEITRRFPLIFIDELQDTGFFLSKCLKSILSS
SYVRGVLVGDPDQSIFEFNGARPDLFDQFEIIQDAEVFPLSTSLRCSKSVAKVASHLKET
GNIVSPENNPVGRALMVTYDDMVVDFNRLSAAVSKSHSNSVIKAIARLNMTVRVLKGHKS
EQPRKLGSPPLNHFQRAVIAFRQGQNSLALAACRASLELALFEQEGITDEQLSKYGLSVF
EWRERCVQCLLEGDSLDVNDTLFGWQSKAWTIITRHISAVAAIKGLAGKSHLKLKEFSNN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttccgaccgttgagcagcaggcagttattgacaacaaaaacgggtctcgaatc
cgcgtggtacgcgcatcgcccggcagcggaaagacttggatggtggccgaactaatcctc
cgcgagctaaactcttggcaaacccaaaccagcggcattgcagctttgtcattcacaaag
gttggcggagaagaaattcgaaaggcggtcggtcgcgatctaagccatccacattttgtg
ggaacaatcgattcttttctatttcgctatgtgattcgtccatttttttgcaaatgttat
ccgatcttccgccaccctcggttgttacccggcgaatggggagcagagcattggagcagc
cttggcaaaggcctgaaggcgaatgtaggcaaaggcattaacctctgtagctgcgtctgg
attgatgaagactgtcaaggcgcaattgcagcgagaaaacctcacccaatgcagccatta
atcaaattgacaggagacgatctgagaattgtaaaagaatgtaaaaataatgtttggaag
aaatctggccttatgactcattcagatgccgcgttgtgggcaagcaagcttttagaagat
gaaaaatataaggcgttaattatcactgagatcacacgccgtttccctttaatttttatt
gatgaattgcaagacaccggtttcttcttgagtaaatgtctgaagagcattttaagcagc
tcatatgtgcgcggcgttcttgttggcgaccctgaccagtcaatttttgaatttaacggt
gcgcgaccagatttgtttgaccagtttgagatcatccaggatgctgaggtctttccattg
agcacgagtcttcgttgctcaaaatcggttgctaaagtggcaagtcacttgaaggagaca
ggaaacatcgtatctcccgaaaataaccctgtcggtagggcgcttatggtgacttatgat
gacatggttgtagatttcaatcggctgtctgcggcggttagtaaatcgcattcaaattcg
gttatcaaagctatcgcaagactcaacatgaccgtaagggtactaaaaggtcacaaatca
gaacagcctcgcaaattgggtagcccacccttaaaccacttccaacgcgctgtgattgct
ttccgtcaaggacaaaactccttggccctcgcggcttgccgggcttcgctcgaattagct
ctgttcgaacaggaaggaattactgatgagcagctatctaaatatggtttgtcggtattt
gaatggagagaacgatgtgtccagtgcctccttgaaggcgattcattagatgttaatgat
acactttttggttggcagagcaaagcgtggacaattataaccaggcatatttctgctgta
gccgcaatcaaaggattggcagggaaatcgcatttaaagctgaaggaattctcgaataat
taa
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