Telmatocola sphagniphila: KIH39_17605
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Entry
KIH39_17605 CDS
T07229
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsph
Telmatocola sphagniphila
Pathway
tsph03420
Nucleotide excision repair
tsph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KIH39_17605
03430 Mismatch repair
KIH39_17605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsph03400
]
KIH39_17605
Enzymes [BR:
tsph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KIH39_17605
DNA repair and recombination proteins [BR:
tsph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KIH39_17605
MMR (mismatch excision repair)
Other MMR factors
KIH39_17605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
CSN8_PSD8_EIF3K
AAA_12
S_tail_recep_bd
Motif
Other DBs
NCBI-ProteinID:
QVL30661
UniProt:
A0A8E6B2S8
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All DBs
Position
4403265..4405070
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AA seq
601 aa
AA seq
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MLRKNQPKPPTEEQEAALRSDARITVVRACPGAGKTEVFVEAIRTRLRHWDHLNGGLAAL
SFTNVARDTIEERIGGATPYPHFIGTLDAFSYRFIVKPFGHLVGLPQNAIRLFPATIAKV
LEDPVIKVGDKNHERASIYSISFFGGDREKPRMKTKLSRSNDFVVPPASEIRVLNEKKRF
WKSTGIVTHSDCHYLSCCIVNHPTFGKNVRKILTSRFPVILIDELQDTGFFLARAFLAIL
AEEKSFGFVVGDPNQAIYGFSGANPSIFKDFESLANAKSLSLSLSHRCSKAVAKVANALS
STGSELIPIPSAIDGSACLSVHDLEEAVLSPAHVEFLKSLKIGSSLAILSRRTKTACGLK
GEIVKDEFRGVSKAARRVHRALQLLINGEPREAHKLLQTELARIILGDETAKAIAWEERG
ISQLNLRNAVFSVLRNSFVYIPNESWNEWVKRTRDKVMEAAKSLGWTDDGKAFLTYRSCN
EKGNTPRSNFMKTSSSMDWDVVSTISTIHKVKGAEFDTVILFVPKTTKGNCPSIEWWPGA
TDADERRIAYVAVSRAKIRFVLCVHKSVFKAIEQLRPDFIKCFEESIPMPQVSKPETPSL
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcaaaaatcaaccaaagcctccaactgaagagcaagaggctgctttacgttcc
gatgctcgaatcacggttgtccgcgcatgtcctggtgctggcaagaccgaagtattcgta
gaggccattcgaacgcgcctccggcattgggaccatctgaatggcggactcgcagcactc
tcatttacaaatgtagccagggacaccatcgaggaacgaattgggggggcgacaccttat
ccacattttattggtacactggacgctttcagctatcgcttcatcgtcaagcctttcggg
catctggttggactaccacaaaacgccattcgtcttttccccgccactatagccaaagta
ctagaagatccagtgataaaggtgggtgacaaaaaccacgaacgagcctcgatttactcc
atctcttttttcggcggtgatcgtgaaaaacctcggatgaagacaaagctgtcaaggtcc
aatgatttcgttgtacctccagcaagtgaaattcgagttctgaatgagaaaaagcgattt
tggaagagcactggtatagtcactcactcggattgccattacttgtcttgttgtatcgtc
aatcatccaacttttggaaagaacgtaagaaagattctgacctctcgtttcccagtcata
ctaatcgatgagctccaagatacaggtttctttttggcccgcgcttttcttgcaattctt
gcagaagaaaaatcgttcggttttgtagtgggggatcctaaccaagccatttatggattc
agtggtgctaaccctagtattttcaaagatttcgaatcacttgcaaacgcaaaatcgttg
tctctttcactcagccatagatgctcgaaggctgtggcaaaagtagccaacgctttatcc
tctacggggagtgaacttatacctataccttcagcaattgacggatcggcttgtcttagt
gttcatgatctagaggaagcggttctttctccggcgcatgtggaatttttgaaaagcctc
aaaattggaagttctcttgcaattctctcacgtaggacaaaaactgcctgcggtctgaaa
ggcgagatagtcaaggatgaatttagaggagtttcaaaagctgctagaagggtccatcgc
gccttacaactcctcatcaatggcgaaccacgcgaggcacacaaattactccaaacagaa
cttgcaaggattatcctaggtgatgaaacggctaaagcgattgcttgggaagaaaggggc
atttcgcaattgaatttgcgaaacgccgtattcagcgtcttgaggaattcattcgtgtat
atcccgaatgagtcatggaacgagtgggtaaagcgaactcgagataaagttatggaagcg
gcgaaatcgctcggctggacagacgatggaaaggcattcctcacatacaggtcgtgcaac
gagaagggcaatactcctcgttccaatttcatgaaaactagttcttccatggattgggat
gtggtgagtacaatttcaactatccacaaagtcaaaggtgcggaatttgatactgtgatc
ttattcgtgccaaaaactacaaaaggaaattgcccatcgatagagtggtggcctggtgct
actgacgctgatgaaagaagaatcgcctatgtcgcggtatctcgggcaaaaattcgtttc
gtgttgtgtgtccacaaatcagttttcaaagcgatagagcagcttcgacctgatttcatc
aagtgtttcgaagaatcgattccgatgccgcaagtctccaagcccgaaacaccatcatta
ttttga
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