Telmatocola sphagniphila: KIH39_21605
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Entry
KIH39_21605 CDS
T07229
Name
(GenBank) DUF11 domain-containing protein
KO
K20276
large repetitive protein
Organism
tsph
Telmatocola sphagniphila
Pathway
tsph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KIH39_21605
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
DUF11
SpaA
FG-GAP
CarboxypepD_reg
FG-GAP_3
TRAP_beta
bMG3
fn3_3
CarbopepD_reg_2
NOMO1-like_9th
MetallophosN
DUF7507
Motif
Other DBs
NCBI-ProteinID:
QVL31416
UniProt:
A0A8E6B5C4
LinkDB
All DBs
Position
5392671..5398181
Genome browser
AA seq
1836 aa
AA seq
DB search
MRWLRKSLSQAVQKSLRLPSPTRKNHLHVQELESRDVPSVSGLVFRDYNANGVLDSREPG
VAGVTVTAYDINNNVVGTTTTTTNGTYNLNFATVSNRPLRLEFTNYASYLQPGAQGASAG
TDVQFVIDGATGVNFDLNNPLDYAQAASQLTIATQEYVYGNQLTGANANSPVLVSFNYNA
AGPANNGGSPYTVLATAKQIGTTWGETYQNTSNTIFVSAFMKSYAGFGPGGPGAIYAVNT
VTGQVTLLYTVQNVGTDPHPTDATNDANWFNDVNSFDSVGKVGLGGLQISADGRSLYTVN
LNTNQLVVIPITASGAFDGGRSVQTFNIPNPNAALGAARAGDIHAFAVALNDGTIYVGEV
DSAQSSQKASDMAAYVYAFNPATNTFNTTPVLNFPLNYNRGDVNVVSGISATWNPWISSW
NQSLALNAGNPLFPSYPQAMLTGITFDNGSMVLGFRDRWGDQTGYKVGAPIAGDNTQYSG
IAGGDILRASQNLNGNGVPNGTFTIEPLTYPPQTNVTKYYTGANYQNFHDDIAEGGVVQV
PGFSDVITSAFDPIQGGSKYTGGVIHLNDTTGVRVAGADYQLYDGSNLAAFGKANGIGDV
VALQSPAPIEIGNRVWADTNGDGIQEAGEPGINGITVDLLLNGNVIQTATTSNGGQYYFT
GLLPNTNYQVRIDPNQTTLTNDGLTTLTQANVGSATDPNINSKATLVGGLAVINLTTGGP
GNNDYSFDVGFTTPPVANVTVKKVADNPTVVAGAQAGYTLTITNTGPATATGVTLSDPLP
ALGGNNVWAIDPASTNAGSFTITGSAGSQSLTFSSSVSTLAVNTPLVVHVVGTTTPTAAA
GFTTTLTNTATVNATNETVHNQTSTATVTVLSPDVTVTKTADAATINGGQTAGFTVTINN
IGAGTANGVTLVDALPNLGTGTTWQIDNTIGNPASFVLGGTAGAQTLSLVNGTNLAAAGS
LKVHITAVSVPGLAPFTANFPNTATVSATNEATSLQNSTATASVTVLSPDVTVTKTADAA
GLTAGQTAGFTVTITNTGLAPAQGVTLTDPLPALGGTNLWSIDTTKGNPAAFQLSGAAGA
QTLSLVGTPTLAAGASLTLHITGVTTTSNLTLPNTATVSATNEAPPLQNQKSTATITIGT
LSIGDFVWKDLNDNGIQDTNEPGVQGVSVELLSGTTVLQTTTTDANGKYLFTNLSAGTYT
VEFVPSTLPAGYVFTKPNATGSTTANDSNANVTTGLTAPITLTNASDLTVDAGLVAVSSL
AGNVYVDNNNNGVRDSGEAGIPNTTLTLTGTDDLGNAVSKTTLTASDGTYSFPNLRPGNY
TITETQPAGFQNGKDAVGSAGGTLGNDVLSNITLAPGVSGINYNFGEINTTDIAVTQTVS
KALVNVGDIVDLTFVVKNNGPLDALNTKMTTPLPTGLVFQNVVSGPGQGTYDPSTGIWNL
GTLQNGVSTTLVIAVQVTQSGVFTNTAVVSTSNPETTYVNNVSPITISTIQGASKQQFLS
SQPTSPGGSVSNLQPPNPGAPSVASDAIIVTGVASGAAPLIQVFNRATGAPQLSFLAFSS
GFLGGVSVALGDVNGDGVADIIVGAGIGGQGHVEVFDGSTGQLIRSFLAFPGFNGAITVA
SADINGDGHADIIVGAGAGAPGGHVEVFDGASTTSTPAMLASFFAYDQGYLGGVNVAAGA
LVAGQNPDVITGSAEGATHVKAFSISGGVATQIRSFIAFAGNASGIAVAAGDTTGSGHAN
IIVSTTSGSSAVGIFDGTTSNLVRSFTAFPGTNAGAFVAAADANGDGKADVIVSGGPGSA
SQVKVFDGPTGSLLDSFLAYNSSFTGGATVAGVRQV
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggctccggaagtctctctcgcaggcggtccaaaagtcccttcgcctgccgtcg
cctacgaggaaaaatcatctccatgttcaggagctggaatctcgagatgtgccttcggtc
agcggcttagtatttcgggattacaacgccaacggggttctggattcgcgtgagccgggc
gtagcgggcgtgaccgtgaccgcttacgacatcaacaacaacgttgtgggcacgacgact
accaccacgaacggcacttacaacctcaactttgccacggtgtccaatcgcccgctgcgc
ttggagttcaccaactatgccagctaccttcagcctggcgctcaaggcgctagcgccgga
accgacgtgcagtttgtgatcgatggggctacaggggtgaatttcgacctcaataaccct
ctggactacgctcaagcggctagccagttgacgatagcgactcaagaatacgtttacggc
aatcagctgacgggagccaatgccaattcccccgtgctggtgagtttcaactataacgcg
gccggtccagccaataatggcggttcgccctataccgttctggcgacggccaagcagatc
gggacgacctggggcgagacttaccagaacacttcgaacaccatcttcgtctcggccttc
atgaagagttatgccgggttcggtcccgggggtcccggcgccatctatgcggtgaacacg
gtgactgggcaggtcaccctcctttacaccgtgcaaaatgtgggcaccgatccgcacccg
accgatgcgacgaatgatgccaactggttcaacgacgtcaattccttcgattccgtgggc
aaagtgggtttgggcggcctgcagatttccgccgatgggcgttcgctctacacggtgaac
ctcaatacgaatcagttggtggtcatcccgatcacagcttcgggggcattcgacggtggc
cgctcggttcaaacgtttaacattcccaatccgaacgcggctttgggagcggctcgcgcg
ggggatattcatgccttcgcggttgctctgaacgacggcacgatttacgtcggggaagtg
gatagcgcccagtcgtctcagaaagcttcggacatggccgcttatgtctacgctttcaat
ccggccacaaacaccttcaacacgactcccgttttgaattttccgctcaactataatcgc
ggggatgtgaacgtcgtctcgggaatctcggccacctggaatccctggatctcgagttgg
aatcaaagtcttgctctcaatgcggggaatccacttttccccagctatccgcaggcgatg
ctgaccggcattactttcgataacggaagtatggttctaggtttccgggatcgttggggc
gatcagaccggatataaggtcggagcgcctattgcaggagataatacacaatacagcggt
attgccgggggcgatattctgcgagcttcccagaatctcaacggcaatggcgtgcccaac
ggtacgttcaccattgagccgctgacctatccgccacaaaccaatgtcaccaagtattac
accggcgcgaactatcagaacttccacgacgatatcgccgagggcggcgtcgtgcaggtt
cccggattttccgatgtgatcacctccgcattcgacccgattcagggtggctcgaagtat
acgggcggcgtgattcatctcaacgacaccaccggagtgcgggtcgctggcgcggactat
cagttatacgacggtagcaatctggcggctttcggtaaggccaacggcatcggtgatgta
gtcgccttgcagtctcccgcacctatcgaaatcggtaaccgcgtctgggccgacaccaac
ggcgatggtattcaggaagctggcgagccgggcatcaatggtataacagtcgatttgctg
ctgaacggcaacgtcattcagacggctacaaccagtaacggaggccagtattacttcact
ggtctcctgccgaacaccaactatcaggttcggatcgatccgaatcaaactactttgacc
aatgacggcctgaccactctcacccaggccaatgtcggcagtgccaccgatccgaacatc
aattcgaaggccacccttgttggcggtctggcagtcattaatctgaccaccggcggtccg
ggtaacaatgactactctttcgacgtcggtttcaccactccgccggttgctaatgtcacg
gtgaagaaagtcgcggataatccgacggttgttgctggggctcaagccggctacacgctg
accatcaccaacaccggcccggctacagccacgggcgtaacgctgagcgatccattaccc
gctctgggcggaaataatgtctgggctatcgatcccgccagtacgaatgccggttcgttc
accatcacaggttccgccggcagccagtcgctgaccttctcctccagtgtgagtactctg
gccgtcaacacgccgctcgtcgttcacgttgtcggtacgacgacgccgaccgcagcggcc
ggatttaccaccacgctgacgaataccgctacggtcaacgcgaccaacgaaactgttcac
aaccagacttcgacggctacggttaccgtgctttcgcctgatgtcaccgtgaccaagacg
gccgatgccgccactatcaatggcggtcaaacggctggcttcacagttacgatcaacaat
atcggtgccggtaccgccaatggcgtgaccctggtcgatgcattgccgaacctgggaact
ggtaccacctggcagatcgataatacgattggtaatccggcctccttcgtactcggcgga
acggccggcgctcagacgctgtcgctggtcaacggcaccaacctggctgcggccggttcc
ttgaaagtgcatatcaccgcggtatccgtacccggtctggctcccttcacggcgaacttc
ccgaacacggccacggtcagcgctaccaatgaagctaccagtctgcaaaattccaccgct
accgcttcggtgacggtactttcgcccgatgtgactgtgaccaagacggccgatgccgcg
ggcctgaccgccggtcaaactgccggtttcaccgtaacgatcaccaacaccggtctggca
ccggcgcagggcgttaccctcaccgatccgctgccggctctgggcggcacgaatctctgg
tcgatcgataccaccaagggtaaccccgccgccttccagttaagcggcgctgccggcgcg
cagaccctgtcgctggtcggaaccccgactctggccgccggggccagcctgacgttgcac
atcaccggtgtgacgactacctcgaatctgacactgcccaacacggccacggtcagtgcg
actaacgaagccccgccgctgcaaaatcagaaatccaccgcaactatcaccatcggcacg
ctgtcgattggcgatttcgtgtggaaagatctgaacgacaacggcattcaagataccaat
gagccgggcgttcagggggtcagcgtcgagttgttgagcggaaccactgttctgcagacc
acgacgaccgatgcaaacggcaagtacctgttcaccaacttgagtgcgggaacttacacg
gtcgagtttgtacccagtacattgcccgccggttatgtctttaccaaaccgaacgcaaca
ggctcaacgacggcgaatgacagcaacgccaacgtaactacgggtctcacggcaccgatt
acactgaccaacgcttcggacctgactgtcgatgccggtctcgtagctgtgtccagcctt
gcgggtaacgtctacgtcgacaacaacaacaacggcgttcgagattctggggaagcgggc
attcctaacacgaccctgaccctgaccggaaccgacgatctgggcaatgccgtcagcaag
acgactttgaccgcttcggatggtacgtatagcttcccgaatctgcgaccgggcaattac
acgattaccgaaacgcagcccgcgggattccagaatggtaaggacgcggtcggcagcgcg
ggtgggaccttgggcaacgatgttctttcgaacattaccctggctcccggcgtcagcggc
atcaactataacttcggggaaatcaacacaaccgatatcgcggtgactcaaaccgtgagc
aaggcgctggtcaacgtcggcgacatcgtcgatctgacgttcgtcgtcaagaacaacggt
ccactcgatgccttgaataccaagatgaccacgcccttgcccaccggtctggtcttccag
aacgtggtcagcggtccgggtcagggcacttacgacccatccacgggtatctggaatctg
ggcactctccaaaacggcgtcagcaccaccttggtaatcgccgtccaggtgactcagtcg
ggagtcttcacgaacacggccgttgtctcgacttcgaatccggagacgacttatgtgaat
aacgtctctccgatcaccatcagcacgattcaaggggcttcgaagcaacagttcctcagc
tcgcaacccaccagtcccggcggctcggtatccaacctgcaaccgcctaatccgggggct
ccctcggtggctagcgacgcgatcattgtgacgggcgtggccagtggagctgctccgttg
attcaggtcttcaatcgagccacgggtgctccgcagctgagcttcctggcctttagctcc
ggcttcctcggcggcgtcagcgtcgctctgggcgatgtaaatggcgacggcgtggccgac
atcatcgtcggggccggtatcggtggacaaggtcacgtcgaagtgttcgacggttcgacg
ggccaactgattcgcagcttcctggcgttcccgggcttcaacggtgccatcacggtggcc
tctgcggatatcaatggcgatggccatgccgatatcatcgtcggagccggtgcgggtgca
cccggtggccacgtcgaagtctttgatggggcttccaccacttcgactcccgctatgctg
gccagcttcttcgcctacgaccagggttacctgggcggtgtgaacgtcgcggccggtgct
ttggtggcgggccagaatccggatgtcatcaccggatcggcggaaggtgctacccatgtg
aaggcgttctcgatcagcggcggagtggctactcaaatccgtagctttatcgctttcgcg
ggtaatgcttcgggtatcgcagttgctgctggagataccacgggcagcggtcatgccaac
atcatcgtctcgacgacctccggctcctcggcggtcggaattttcgatggaaccacttcg
aatctggttcgctcgttcaccgcattccccggtacgaacgccggggccttcgtggcggct
gccgacgcgaatggcgatggtaaggccgatgtgatcgtctcgggtggtcccggttcggct
tctcaggtcaaagtgttcgatggcccgaccggttcgctgctggatagcttcctggcctac
aacagctccttcactgggggagccactgtggcgggcgtccgtcaggtctag
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