Telmatocola sphagniphila: KIH39_25790
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Entry
KIH39_25790 CDS
T07229
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tsph
Telmatocola sphagniphila
Pathway
tsph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KIH39_25790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsph03021
]
KIH39_25790
03400 DNA repair and recombination proteins [BR:
tsph03400
]
KIH39_25790
Enzymes [BR:
tsph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KIH39_25790
Transcription machinery [BR:
tsph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KIH39_25790
DNA repair and recombination proteins [BR:
tsph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KIH39_25790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AMIN-like
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QVL32206
UniProt:
A0A8E6B5P7
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All DBs
Position
6430844..6431845
Genome browser
AA seq
333 aa
AA seq
DB search
MRIRWRGLELPTRVASDRATLTDTFGKFYAEPFERGLGITIGNALRRLLLSSLEGSAVTR
VKIQGVQHEITSLPGVVEDVTDIILNIKSLVVKNTSDQPKTITIKRHKEGVVRAADIEHD
ESIQIINPEHIIATLTGDVPFVVELTVENGRGYQSAEDQLTKDREVGVIPVDASFSPVVR
VKYSIEETRVGQKTNYDRLVLEITTNGTTSPQMALVESSKILRKHLNPFIEYSEQGTELP
LDDKLEIGSTAQQAGDPELDRKLNMSLAELDLSVRATNCLESEGIATVRDLVIRNEEELL
EVRNFGDTTLKEVRQKLSEIGLTLGMRLPTARR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcgttggcgcggcctggaacttccgactcgcgtagcctcggatcgagctact
ttgacggacacctttggcaagttttacgcagaaccgttcgaacgcgggctgggtatcact
atcggcaatgcattgcgtcgcctcttgttgtccagcctcgaaggaagtgccgtcacccgg
gttaagattcagggcgttcagcacgagatcaccagcttgccgggcgttgttgaggatgtc
acggacattatcctgaacatcaagagcctggttgttaaaaatacttcggatcagccgaaa
accattaccatcaagcgacacaaagaaggtgtcgtccgagcggctgatatcgaacacgat
gaaagtattcagattattaatcccgaacacatcattgccacactcactggggatgtgcct
ttcgtcgtcgaactgacggtcgaaaacggtcggggttaccaatcggccgaagatcaattg
accaaggatcgcgaagtcggcgtgattcccgtggatgccagtttctcgcccgtggtccgc
gtgaaatattcgatcgaagaaacccgcgtcggacagaagacgaactacgatcgcctggtt
ctggaaattacgacaaacgggaccaccagtccccagatggccctggtcgaatcttcgaag
attcttcgcaagcatctcaacccgttcatcgaatattccgaacagggtaccgaactgcct
ctggacgacaaactcgaaattggctcgacagctcaacaggccggcgatccggaactggat
cgcaagctgaatatgagcctggccgagttggatctgtcggtccgggccacgaactgcctg
gaatccgaagggatcgccactgtccgcgatcttgtgattcgaaacgaagaagagctgctc
gaagttcgtaacttcggggacacgacgctgaaagaagttcgacaaaagctttcggaaatc
ggtctgaccctgggaatgcgattacctactgcacgacgataa
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