| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
tsph Telmatocola sphagniphila
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tsph00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KIH39_26010 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:tsph03021]
KIH39_26010 (rpoC)
03400 DNA repair and recombination proteins [BR:tsph03400]
KIH39_26010 (rpoC)
Enzymes [BR:tsph01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KIH39_26010 (rpoC)
Transcription machinery [BR:tsph03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KIH39_26010 (rpoC)
DNA repair and recombination proteins [BR:tsph03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KIH39_26010 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(6479816..6484219)
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| AA seq |
1467 aa
MSTTAAVAPQTAVDTSNYDRINDYGSVRISLASPHDIRSWSFGEVKKPETINYRTYRPEK
DGLFCERIFGPEKDWECTCGKYRGMKYKGMVCDKCGVKVTHSRVRRKRMGHIELAAPVVH
IWFFKAMPSRLGTLLDMKTSSLEKIVYFQDYVVVEPGETKLKERQLLTEDEFRRAREEYG
DTFEAEMGAEAIKKLLEKLDLVKESNVLRDLLDKENKKEKASKQKLRDFVKRLKTIEALR
DSSNKCEWMVLECIPVIPPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLKKLVDLNAP
EVIIRNEKRMLQQSVDALFDNNRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVD
YSARSVIVVGPELRLHQCGLPKKIALELFQPFIIRRLKELGYADTIKSAKKMLERKDDRV
FDILEEVTQAHPVLLNRAPTLHRMGIQAFEPVLIEGNAIRIHPLVCKGFNADFDGDQMAV
HLPLSIEAQIEATVLMMSTNNIFSPANGNPIITPSQDIVMGCYWLTASRGEEGEKVEPGD
GMIFHSPNELFMAFQQNKLGVHARIKIRLPLEKKVLTEIKLEKDKTVVEELSRKTSKLVK
TTVGRVIFNDILHPKMAFYDLPLSSKHLSRIIADCYQLLGRRETIELLDRMKDMGFRQST
RSGLSFATSDLKTPDNKERVLKDKDKEVDKLRKNFERGLITEKERYNKVIDQWNEARVKI
TETMMAELKADRRIDIKTGKEAPYLNPIYLMAHSGARGGIEQIRQLAGMRGLMAKPSGAI
IETPIKANFREGLTVLEYFSSTHGARKGLADTALKTADSGYLTRKLADVAQNVVVTMHDC
GTTQEATKGIYYKGDEIDRGIADAIRGRVSRQTILHPETGKVVIKENEMITPEIAKEIEK
LRIDKVTVRSPMVCTAPLGVCRLCYGMDLATGALVEEGMAVGIIAAQSIGEPGTQLTMRT
FHSGGVAREENLDSEHKSKKGGVVSFERITSVEHVSKDPAGNDQRKIIALSRTGEIVITK
PKDASPERFPIPNGAELLVREGEEVPLGKVLCRWDPHMTQIISEESGRVRFEDMKEGETI
RREKDSTGIERFIVMEHRGELHPTIHIEDSKGVTLRAYFIPERAYLEVKNGDKVTAGAML
AKTPKESGKTQDIVGGLPRVTEIFEARRPRNPAVMSEVSGKIRQGDKKRGKRLIYIQPED
EKTGRPIGSEVEHQVPAGAQLRVHTGEYVKAGDPLVFGPLVPHDILRVSGIETVQDYLVR
EVQQVYRSQRVDIDDKHIEVIVTQMLRKVKVETMGDTNMLPGAVMDKFTFRAVNDRLMNE
CVKIKHKNDSIFEDAKIVSKEAYEEEVARVEAEGGKKPTKTAPEPATCSTVLLGITKASV
QSDSFISAASFQETTKVLTEAALAGKVDNLVGLKENVILGHLVPAGTGFRLFQDSEVKIN
APVLDSSDDIPESLATEGPTELLATTE |
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| NT seq |
4404 nt +upstreamnt +downstreamnt
atgagtacgaccgcagcagttgccccccagaccgcagtagataccagcaactacgatcgc
atcaatgactatggctcggtgcgcatcagtctggccagcccgcacgatatccgcagctgg
tccttcggtgaagtgaagaagcccgaaacgatcaactaccgcacctatcggcccgaaaaa
gacggcctcttctgcgagcgcattttcgggccggaaaaggactgggaatgtacctgcggt
aagtaccgcggcatgaagtacaaaggcatggtttgcgacaagtgcggcgtgaaagtcacg
cacagccgcgtccgccgcaagcgcatgggccacatcgaactggccgctcccgtcgttcac
atctggttcttcaaagcgatgcccagccgcctgggcaccctgctcgacatgaagaccagc
agcctcgaaaagatcgtctacttccaggactatgtcgttgtcgaaccgggcgaaaccaag
ctcaaagaacggcagcttctgactgaagacgaattccgccgggctcgcgaagaatacggc
gacaccttcgaagccgaaatgggcgctgaggccatcaagaagcttctcgaaaagctcgac
ctggtcaaggaatccaacgttctgcgcgacctgctcgacaaggaaaacaagaaggaaaaa
gccagcaagcagaagctgcgcgacttcgtcaaacgactcaagaccattgaagctctgcgc
gatagctcgaacaagtgcgagtggatggtgctggaatgcattcccgtcattccgcccgac
ctgcgtcctttggtgctgctcgatagcggcaacttcgcgacctccgacttgaacgatctc
taccgccgcattatcaaccgcaacaaccgtttgaagaagctcgtcgacctgaacgctccg
gaagtgatcattcgcaacgaaaagcgaatgcttcagcagtccgtcgatgccctgttcgac
aacaaccgctgcaaacggcccgtgctcggttccagcaaccgacctttgaaatctttgacc
gatatgatcaaaggtaagcagggtcgattccgcgaaaaccttctaggcaagcgcgtcgac
tactcggcccgctcggtgatcgtcgtcggtcccgaactgcgtcttcaccagtgcggtctg
cccaagaaaatcgctctcgaattattccagccgttcatcatccgccggctgaaagagctc
ggctacgccgataccatcaagtcggccaagaagatgctcgagcggaaagacgatcgcgtt
ttcgacattctcgaagaagtcactcaggcccacccggtgctgctgaatcgtgccccgacc
ttgcaccgcatgggtatccaggcgttcgaaccggtcctgatcgaaggcaacgcaattcga
attcacccgctggtctgcaaaggcttcaacgccgacttcgacggtgaccagatggccgtg
cacttgccgctgtcgatcgaagcgcagatcgaagccacggtgctgatgatgtcgacgaac
aatatcttcagccccgccaacggtaacccgattatcacgccgtcgcaagacatcgtgatg
ggttgctactggctgaccgcttcccgcggcgaagaaggcgaaaaggtcgagccgggcgac
ggcatgatcttccacagcccgaacgagctgttcatggccttccagcagaacaaactgggt
gtgcatgcccgcatcaagatccggttgcccctcgaaaagaaggtgctgaccgaaatcaag
ctggaaaaagacaagaccgtcgtcgaagaactctcccgcaagaccagcaagctggtcaag
accaccgtcggccgggtgatcttcaacgacatcctgcaccccaagatggccttctacgac
ctgcctttgagcagcaagcacctttcgcgcatcatcgccgactgctaccagttattgggc
cgtcgcgaaacgatcgaactgctcgaccgcatgaaagacatggggttccggcagtcgacc
cgttccggtctgtcgttcgcgacctccgacctcaagacgccggacaacaaggaacgcgtg
ctgaaggataaggataaggaagtcgataagcttcgtaagaacttcgaacgcggcttgatc
accgaaaaagagcgttacaacaaggtcatcgaccagtggaacgaagcccgcgttaagatc
actgagacgatgatggctgaattgaaggccgaccgccgtatcgatatcaagaccggcaaa
gaagccccatacctgaatcctatttacctcatggctcactccggtgcccgtggtggtatc
gaacagatccgccagctggccggtatgcgcggtttgatggccaagccttcgggagccatc
attgaaacgcctatcaaggcgaacttccgcgaaggtctcacggtgctcgaatacttctcg
agtacgcacggggctcgtaagggtctggccgacaccgcgctgaagacggcggactcgggt
tacctgacccgtaagctcgccgacgtggcccagaacgtggtcgtcaccatgcacgactgc
ggaaccacccaggaagccactaaaggtatctactacaagggcgacgaaatcgaccgtggc
atcgccgatgcgattcgcggccgcgtttcccgtcagacgattctgcatcccgaaaccggt
aaagtggtcatcaaagaaaacgagatgatcaccccggaaattgccaaggaaatcgaaaaa
cttcgcatcgacaaggtgacggtacgatctccgatggtctgcaccgctcctctgggcgtc
tgccgactctgctacggtatggacttggcgaccggtgctctggtcgaagagggcatggcg
gtcggtatcatcgccgctcaatcgatcggcgaaccgggcacgcagttgacgatgcgtacg
ttccactccggtggggtggctcgcgaagaaaacctcgatagcgaacacaagtccaaaaag
ggcggcgtggtcagcttcgagcgcattacttcggtcgaacacgtcagcaaggatcctgcc
gggaacgatcagcgcaagattatcgcactgtcgcgaacgggcgaaatcgtcatcaccaag
ccgaaggatgcttcgccagaacgcttcccgattcctaacggggccgaactgctggttcgc
gaaggggaagaagttcccctgggcaaagtgctgtgccgctgggatccgcacatgacccag
atcatctccgaagaatcgggccgcgtccgcttcgaggatatgaaagaaggcgaaacgatt
cgccgcgagaaggactcgaccggtatcgaacgattcatcgttatggaacaccgcggcgag
ttgcacccgaccatccacattgaagactccaagggcgtcaccctgcgagcctacttcatt
ccggaacgggcctacctcgaagtgaagaacggcgataaggttaccgccggtgcgatgttg
gcgaagaccccgaaagaatcgggcaagacgcaggacatcgtggggggtctgcctcgcgtg
acggaaatcttcgaagctcgtcgaccccgcaacccggccgttatgtcggaagtttcgggt
aagatccgccagggcgacaagaagcgcggcaagcggttgatctacattcaacccgaagac
gaaaagaccggccgaccgatcggcagcgaagtcgagcatcaggttcccgccggggctcag
ctccgcgtccacacgggcgaatatgttaaagctggcgatccactggtcttcggccccttg
gttccgcacgatattctccgcgtcagcggtatcgaaaccgtgcaggactacctggtccgc
gaagttcagcaggtctatcgtagccagcgcgtggatatcgacgacaagcacatcgaagtc
atcgtcacccagatgcttcgcaaggtgaaagtcgaaaccatgggcgacaccaacatgctg
cccggggccgtcatggacaagttcactttccgggccgtcaacgaccggctgatgaacgag
tgcgtgaagatcaagcacaagaacgattcgatcttcgaagatgccaagatcgtcagtaag
gaagcttacgaagaagaagtggcccgcgtggaagccgaaggtggcaagaagccgaccaag
acggctcccgaaccggccacctgctcgaccgtgcttttggggattactaaagcatccgtg
cagtccgatagctttatctcggccgcttccttccaggaaacgaccaaggtgctcaccgaa
gcggctctggccggcaaggtggacaatctggtcggtttgaaggaaaacgtgatcctgggt
cacctcgtacccgccggaaccggcttccgtctgttccaggatagcgaagtgaagatcaac
gccccggttctcgatagctcggatgacattccggaaagcctggccaccgaaggaccgacg
gaacttctggccacgaccgagtga |
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