Thalassovivens spotae: UM181_03440
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Entry
UM181_03440 CDS
T11788
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tspo Thalassovivens spotae
Pathway
tspo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tspo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UM181_03440 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tspo03019
]
UM181_03440 (pnp)
03016 Transfer RNA biogenesis [BR:
tspo03016
]
UM181_03440 (pnp)
Enzymes [BR:
tspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UM181_03440 (pnp)
Messenger RNA biogenesis [BR:
tspo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UM181_03440 (pnp)
Transfer RNA biogenesis [BR:
tspo03016
]
Prokaryotic type
tRNA degradation factors
UM181_03440 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
OB_PDCD11
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WQC63680
LinkDB
All DBs
Position
668226..670367
Genome browser
AA seq
713 aa
AA seq
DB search
MFNVTTKSIEWGEERLTLETGKVARQADGTVIATLGETSVMANVTFAKAQKPGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPSEKETLTARLIDRPIRPLFVDGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGAPFMGPIAGCRVGYTDGEYVLNPTVDDMDHLRNNPDQR
LDLVVAGTKDAVMMVESEAYELTEEEMLNAVTFAHAQIQPVIDLIIDLAEDAAKEPFHFE
APDYADLYQAIKAAGDADMRAAFALSDKQERTAAVSAARATITAALSDEQLADANLGSAM
KKLEAGILRGDVVKTGKRIDGRGTSDVRGIVCETGMLPRTHGSALFTRGETQGLVVTTLG
TGDDEQIIDALHGNSRSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
ATDFPYTVRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEDSGDFA
ILTDILGDEDHLGDMDFKVAGTAEGITSLQMDIKVAGITPEIMKQALAQAKEGRLHILDE
MSKSLTEAADFSVHAPRIETMTVPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGVIKI
ASPDGESIKKAYDMIYSIVAEPEVGKIYDGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQDVKVKLLGFDDRGKVRLAMKMVDQETGAEIVEEKKDESAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgtaacgacgaaatcaatcgaatggggcgaagagcgcctgacactcgaaacg
ggcaaagtggcccgtcaagccgatggcaccgtgattgccacgctcggcgaaacctcagtg
atggccaatgtgaccttcgcaaaagcacaaaagccggggcaagatttcttcccgctgacc
gtgcattaccaagaaaaatattacgcagcgggtaaaatcccgggcggctttttcaagcgc
gaagcgcgcccttctgaaaaagaaactttgaccgcgcgcttgattgatcgcccaattcgc
cccctctttgtggatggcttcaaaaatgaagtcttggtgatgtgtaccgttcttagccat
gatttggtgaacgatcccgatattgttgcaatgatcgcggcctctgctgcgctgacaatc
tctggtgcgccattcatggggccgatcgccggatgccgtgtgggatataccgatggtgag
tatgttttaaacccgaccgtggatgatatggatcatctgcgtaacaacccagatcagcgt
ttagacctggtcgttgccggcaccaaagacgccgtgatgatggtagaatcagaggcttat
gagctgaccgaagaagagatgctcaacgcggtgacatttgcccatgcgcaaatccaaccc
gtgatcgatttgatcattgatttggcagaagatgcggcgaaagagcccttccatttcgaa
gcccccgattacgccgatctttatcaagcgatcaaagcggcaggtgacgcagacatgcgc
gccgcgtttgccttaagcgataaacaagagcgcacagccgcagtctcagccgcgcgtgca
acgatcacggcggcgctgagcgacgagcaattggccgatgccaatctcggatcagcgatg
aaaaagctggaagccggcatcctacgcggcgacgtggtaaaaacaggcaaacgtatcgac
ggacgcggcaccagcgatgtgcgcggaattgtttgcgaaaccggcatgctgccacgcacc
cacgggtctgctttgtttacgcgcggcgaaacccaaggcttggtggttaccacgcttggc
acgggcgatgatgagcaaatcatcgatgccttgcatggaaattctcgcagcaacttcctt
ttgcattataacttccccccctattcggttggtgaagcgggccgcgtgggccctcctggt
cgccgcgaaattggccacggaaaattagcatggcgcgcgctacaggcggttttgcctgcg
gcaaccgactttccttataccgtgcgcgttgtctctgaaatcactgaatcaaacggatcc
tcttccatggcttccgtctgtggaggctctttgtcaatgatggatgccggagttcccttg
aaagccccggttgccggcgttgcgatgggtctgatcttggaagacagcggagatttcgca
atcctaaccgatatcttgggcgatgaagatcaccttggcgatatggatttcaaagtggcg
ggaaccgctgaggggatcacctcattgcaaatggacatcaaagtcgctggcatcacgcct
gaaatcatgaaacaggctctggcgcaggccaaagagggccggctgcatattcttgatgaa
atgtccaaatctctgaccgaagccgctgacttcagcgttcacgcgccgcggattgaaacg
atgaccgttccaacggataaaatccgtgaagtcatcggatcgggcggcaaagtcatccgt
gaaatcgtggaagtctcgggggcaaaagtcgatatcaatgatgaaggggtgatcaaaatc
gcctctccagacggggaatcgatcaaaaaagcctatgatatgatctactcaatcgttgcc
gagcccgaagtgggtaagatttacgatggcaaagtggtgaaaatcgttgatttcggagct
tttgtaaacttctttggcaagcgcgatggtttggtacatgtaagccagattgaaaaccgc
cgcttgaaccatccgtcagatgttctcaaagaaggccaagatgtcaaagtcaaactgctc
ggctttgatgatcgtggcaaagttcgcttggcgatgaaaatggtcgatcaagaaaccggt
gcagaaatcgttgaagaaaagaaagacgaatctgcagaataa
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