Thamnophis sirtalis (common garter snake): 106537479
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Entry
106537479 CDS
T06107
Symbol
SYF2
Name
(RefSeq) pre-mRNA-splicing factor SYF2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106537479 (SYF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106537479 (SYF2)
Spliceosome [BR:
tsr03041
]
Complex B
Other components
Prp19-related factors
106537479 (SYF2)
Complex C
106537479 (SYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
MoCoBD_2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
106537479
NCBI-ProteinID:
XP_013907092
UniProt:
A0A6I9X011
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MATAVDTGASADGTMASNTSDSPMTAEEAAAQKREERLRKFRELHLKRNEARKLNHQEVV
EEDKRLKLPSNWEAKKARLEWELKVEEKKKECLLKGEDYERVKLLEVSAEDAERFERKRK
KRNPDSGFSDYAAAQLRQYQRLTRQIKPDLEKYEKLKEESGEDFFPTSNSLLHGTHVPSK
EGVDKMVSDLGKQIQKREKYSRRRSYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQN
LERGTAV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgctgtggatacgggagcctctgcggatgggacgatggcttccaacacttca
gacagtccgatgacagctgaagaagctgctgcccaaaagagagaagaacgccttcgaaaa
ttccgagaacttcatttgaaaaggaatgaagcccgtaagttaaatcatcaggaagttgtg
gaagaagataaaaggctgaagttaccaagcaactgggaagcaaaaaaggctcgcttagaa
tgggaactcaaagtggaagaaaagaaaaaggaatgcttgctgaaaggagaagattatgag
agagtaaagctgctagaagtaagtgcagaagatgcagaacgctttgagaggaaaaggaag
aagagaaaccctgattctggattttcagactatgcagctgctcagttacgccagtatcag
cggttgaccaggcaaattaaacctgacctagaaaagtatgaaaaattaaaagaagaaagt
ggtgaagatttttttccaacttcaaatagtttactccatggaactcatgtgccctccaaa
gaaggcgttgacaaaatggtttcagatcttggaaaacaaattcaaaaacgtgaaaaatac
agccggagacgttcttacaatgatgatgcagatattgactacatcaatgagcgaaatgcc
aagttcaataaaaaggctgagaggttctacgggaaatacactgcagaaattaaacagaat
ttggaaagagggacagctgtgtag
DBGET
integrated database retrieval system
