Thamnophis sirtalis (common garter snake): 106537514
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Entry
106537514 CDS
T06107
Symbol
GBF1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106537514 (GBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106537514 (GBF1)
Membrane trafficking [BR:
tsr04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
106537514 (GBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
106537514
NCBI-ProteinID:
XP_013907145
UniProt:
A0A6I9XR11
LinkDB
All DBs
Position
Unknown
AA seq
1866 aa
AA seq
DB search
MPRRLSTPAKAGPVVNDAGWMEGTTRIVDKNIYTVQGEINTVIGAIKRSARWSTHVRLDE
ERDPLLHSFSVLKEVLNNVTELSVIEPIVFLRPFLEVIRSEDTTGPITGLALTSVNKFIS
YGLIDSNHEGTAEGMENLADAVTHARFVGTDPGSDEVVLMKILQVLRTLLLAPVGAHLTN
ESVCEIMQSCFRICFEMRLSELLRKSAEHTLVDMVQLLFTRSSQFKEEPKSYVGTNIRKL
KMRAGGMSDSSKWKKQKRSLRNSCHVTKASQGIEQSAANGTGEVNVTDVSSPISSGNSEN
ISSIVSPVTDSGLELSSQICSKDDLTDLQLVKSLGINTTMPLNDFRAREQLELQNECPQR
EKTPSASVESIPDVLEECTSVTEHSDSVSIHDMDYVNPRGVRFTQCSQKEGTTLVPYGLP
CIRELLRFLISLTNPHDRHNSEVMIHMGLQLLTVALELTCVSNCPSLLGLIKEELCRYLF
QLLNMERLNLYSASLRVCFLLFEKMREHLKFQLEMYIKKLMEIITMESPKMIYEMKEMAL
EAIVQLWRIPSFVTELYINYDCDYYCANLFEDLSKLLSKNAFPVSGQLYTTHLLSLEALL
TVTDQIEARCQAKVLRGIYQQEKEILKPNTEIANIIREAITEELQTKLKSSTAELPETRS
SSKDCLVTSHLKQQDCLNSDMENDTEKVIPRKPTRFSCFLPKTQELIMIKNKKKLLISGS
EHFNQKPKKGIQLLQEKNLLATPMDNDQVAKWLRENPKLDKKMIGEFVSDRKNVDLLDSF
VRTFHFQGLRLDEALRLYLEAFRLPGEAPVIHRLLETFTEYWHKSNGTPFANSDACFALA
YAVIMLNTDQHNHNVRKQNVPMTLEEFRKNLKGVNGGKDFDQEMLEDIYYAIKNEEVVMP
DEQTGLVKENYVWNVLLHRGATEEGVFLHVPPGSYDHDLFAMTWGPIVAALSYVFDKSLD
ETVIQKTISGFRKCAMISAHYGLSDVFDNLIISLCKFTALSSESIENLPTVFGSNPKAHI
AAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAELLPKTMVEVEDFVDPNGKISLQREET
PSNRGESTVLIFVNWLTLSGTEQSGMRGPSTENQEAKRMALECIKVCDPEKLITESKFLQ
LESLQELMKALISVSPDEETYDEEDCAFCLEMLLRIVLENRDRVTFVWQAMRDHLYHLCI
NAMEYCCLVERAVVGLLRLAIRLLRREEISAQVLLSLRILLMMKPSMLNRASHQIAYGLH
ELLKTNAANIHSGEDWYTLFTLLECIGSGVKPPLALQPTRIENDTGAQSDSEIYHPNETS
LDRGYTSDSEVYADHSKQGKLHRSVTDVDVVNSGWLVVGKDDIDNSTMAGLSRLGNSPLV
NQYSLTVGMDLGPHNTKSLMKCVESLSFIVRDAAHVTPENFELCVKTIRIFVEASLNGGC
KSQEKRGKNHKYDSKSARFKKKAKENSLRHFKTSSQHQHRSTSEDEDEDESVPASYHTVS
LQVSQDLLDLMHTLHTRAATIYSSWAEEQQHLETSEKKIEANSRALWINCWCPLLQGIAC
LCCDARRQVRMQALTYLQRALLVHDLQALDALEWESCFNKVLFPLLTKLLENISPADIGG
MEETRMRASTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLPEAIPESL
KNMLLVMDTAGIFHNADSRTGYSDLWEITWERIDCFLPKLRDELFKQTVIQDPVSTLPVE
VHLPKASISAQTHSSGEDSRPSTHSASSEKSPELAASDSENACISSHFGSHFASPATPGK
MNMATDIPPAVAQQPLILQPLASPLQVGVPRLSLPIILNPALIEATSPVPLLATQQSTDS
TISEIN
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgccgagacgcctgtcgacgcccgcgaaagccggccccgtggtgaacgacgccggatgg
atggaagggactaccaggattgtagataagaatatttacactgtacaaggtgaaatcaat
acagtaataggagccataaaacgcagtgcaagatggagtactcatgtacgtttggatgaa
gaacgtgatcccctattgcacagcttcagtgttttgaaagaagttttgaacaatgtaact
gaactttcagtcattgaaccgattgtttttcttcgaccttttctggaagttattcgatca
gaagatactacaggcccaattactggactggctctgacatcagtaaacaaattcatttca
tatggactaatagattcaaatcatgagggcacagctgagggaatggaaaacttggcagat
gctgtaacacatgcccgatttgtgggcacagatcctggaagtgatgaggttgtcttgatg
aagattttgcaggtcttgaggactctcctccttgctccagttggagctcatctcacgaat
gaatctgtgtgtgaaatcatgcagtcttgcttccgtatatgctttgagatgaggcttagt
gagttattgagaaaatctgcagagcacactctggtcgacatggtacagctgctcttcaca
agatcatctcagtttaaagaggagcctaagagctatgtagggaccaacataagaaagttg
aaaatgagagcaggagggatgagtgattcatcaaaatggaagaagcagaaacgatcacta
agaaactcttgccatgtaaccaaggcatctcaaggaatagaacagtcagctgctaatggc
acaggtgaggtcaatgtcactgatgtatcttctccaatttcatctggaaattcagaaaat
atatcttctatagttagtcctgtcactgacagtggtttagagttatcttcccaaatttgc
tcaaaggatgatcttacagatttacaacttgtcaaatctttgggaatcaatacaacaatg
cccttaaatgattttagagccagagagcagttagaactacagaatgaatgtcctcagagg
gaaaagactccatctgcctcagtagaatccatcccagatgttcttgaagagtgcacttct
gtaactgaacactcagattctgtttcaattcatgacatggactatgttaaccctcgaggt
gtacgatttactcagtgttctcaaaaagagggaacaacattagtcccttatggattacca
tgtattcgtgaactactgcgtttcctcatctccctcactaatccacatgaccgacacaat
tctgaggtgatgatccacatgggtctacagctactcacagttgctcttgaattgacttgc
gtatcaaactgcccatctctcttaggacttataaaagaagaattatgtcggtatctcttt
caattattgaacatggagcggctcaatttatattcagcttcccttagggtatgcttcctt
ttatttgagaaaatgagagagcacctgaagttccaactggagatgtatatcaagaaactg
atggagatcatcacaatggaaagccccaagatgatttatgaaatgaaggagatggccctg
gaggctatcgttcagctatggaggattcctagctttgtaactgaactctacattaactat
gactgtgactactactgtgctaatctttttgaagacctcagcaaactgctatccaagaat
gcttttcctgtttctggacaactgtacactactcatttgctgtcacttgaagcactgttg
acagtgactgatcaaattgaagcacggtgccaagccaaagtactcagaggcatatatcag
caagagaaagaaatactaaaaccaaatacagaaattgccaatatcattagagaagcaatt
actgaagaattgcaaacaaaacttaaatcatccactgcagaattaccggagacacgttca
tcgagtaaggactgcttggtgacctcccacttgaaacagcaagactgtctgaattcagat
atggaaaatgatacagaaaaggtcatcccaagaaagcctactcgattttcctgcttctta
ccaaaaacacaagaactgataatgattaagaataaaaaaaagctcttgataagtggttca
gagcacttcaatcagaaaccaaaaaaaggaatacagcttcttcaggagaaaaatctattg
gctaccccaatggataatgatcaagtggccaagtggctgagagaaaatcctaaactggac
aagaaaatgattggagaatttgtgagtgatcggaaaaatgtggatttgctggatagtttt
gtcaggactttccatttccaaggtttacgactagatgaagctttaagactctacctagaa
gcctttcgtttgccaggagaagctcctgtgattcacaggctattggaaacctttacagaa
tattggcataaatcaaatgggactccatttgctaatagtgatgcctgttttgctttagcc
tatgcagttatcatgctgaacactgatcagcacaatcataatgttcgcaagcagaatgta
ccaatgacgttagaggaattccgaaaaaatctgaaaggagtaaatggtggcaaagatttt
gaccaagagatgttagaagatatatattatgctatcaaaaatgaagaagtggtgatgcct
gatgagcagacaggtttagtaaaagaaaactatgtatggaatgtgttgttgcaccgtgga
gccactgaagaaggagtctttctgcatgttccacctggcagctatgatcatgacctcttt
gccatgacctggggacctattgttgcagctctttcctatgtttttgacaagagcttagat
gaaacagtcatccagaagactatttctggtttcagaaaatgtgccatgatctctgctcat
tacggcctcagtgatgtttttgacaaccttataatttctctctgtaaattcacagccctc
agcagtgagtcaattgagaatttgccaacagtttttggaagcaatccaaaagcccacatt
gcagcaaagactgtgttccatttggctcatcgacatggtgatattttacgagagggctgg
aaaaacataatggaggcaatgttgcaacttttcagagcagaattattgccaaaaaccatg
gtggaggttgaagattttgtagatcccaatggcaagatctctcttcagagagaggaaaca
ccttctaatcgtggtgagtctacagtgctcatttttgttaactggctgacactcagtggc
acagaacaatctggtatgagaggaccatccacagagaatcaggaagcaaagagaatggcc
ctggaatgtataaaggtatgtgatccagagaagttaatcactgagagcaagtttctgcaa
cttgagtccctgcaagaattaatgaaggctctcatatctgtgtctcctgatgaggaaacc
tatgatgaagaagactgtgctttttgtttggagatgcttttgaggattgtgctggaaaat
agggatcgtgtgactttcgtttggcaggcaatgcgagatcatctttaccatttatgtatt
aatgctatggaatactgttgtctagtggaaagagcagtagtgggtctattgagactggca
atccgacttctgcgcagagaagaaataagtgcccaggtgttgctctccttgcgaatcttg
ctcatgatgaaacccagcatgttaaacagggcaagtcatcagattgcatatggccttcat
gagcttctcaagactaatgctgccaatattcactctggagaagactggtacacactcttt
actctcttggaatgcattggttctggggtgaaaccacccctagcgctgcaacctacaaga
atagagaatgatacaggagctcaatcagacagtgagatctatcatccaaatgaaaccagc
ctagatcgtggctatacttctgattcagaggtatatgcagatcacagcaagcaaggtaaa
ttgcatcgttctgtcactgatgtagatgtggtgaacagtggctggcttgtggttgggaaa
gatgacatagataattcaaccatggctggactttccagactgggaaattctcccttggtg
aatcagtatagtctgactgtgggaatggacctgggtcctcataataccaaatctctcatg
aagtgtgttgagtccttatcttttattgtgcgagatgcagctcatgtaacccctgagaac
tttgagttgtgcgtcaaaacaatccgcatctttgtggaagccagcctaaacggagggtgt
aaatcccaggagaaaagaggaaaaaatcataaatatgactccaaatcagcacggtttaag
aagaaagcaaaggaaaactctctgagacactttaaaacctccagccaacatcagcaccgt
tccactagtgaagatgaggatgaggatgagagtgtccctgccagttatcacactgtatct
ttacaggttagtcaagacctgttggatctaatgcatacccttcatacgcgagctgctacc
atctacagttcttgggcagaagagcaacagcatctggaaacttcagagaagaaaatagaa
gcaaattctcgagcattatggatcaattgttggtgcccattgttgcaagggattgcttgt
ttgtgttgtgatgcaagacgacaagtacggatgcaggcactgacctacctgcagcgggct
cttcttgtgcatgatttacaagctcttgatgctttggaatgggaatcctgtttcaataag
gttctgtttcctttgctgaccaaacttctggaaaatattagcccggcagatattggaggg
atggaagagaccagaatgagagcttcaactttactctccaaggtcttcttgcaacatttg
tccccactcctctctctcccaacatttgctgctttatggctgacaatattggatttcatg
gataaatacatgcatgctggctccagtgacttgttgccagaggccatccctgaatcactg
aagaatatgctactagtaatggacacagctgggatattccataatgctgattcacgaaca
ggctactcagatctatgggaaatcacctgggagcgcatagactgctttttgccaaaacta
cgagatgagctcttcaaacagacagtcatccaagacccagtttctaccttaccagtagaa
gtacatcttccaaaagcatcgatatctgctcagacacattcctctggagaggattccaga
ccatctactcattcagcatcatctgagaagtctccagaactagcagccagtgattctgag
aatgcctgcatttccagtcactttggatcacattttgcctctccagcaacacctgggaag
atgaacatggctacagatattcctccagcagtggcacagcagcctcttattcttcaacca
ctagcctcccctttacaagtgggagtgccacgtttgtctctgcctataattctgaaccca
gctctcatagaggcaacctcccctgttccccttttggctacccagcagtctactgactcc
acaatttctgaaataaattaa
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