Thamnophis sirtalis (common garter snake): 106537521
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Entry
106537521 CDS
T06107
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106537521 (CTR9)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
106537521 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_1
TPR_2
TPR_19
TPR_8
TPR_16
TPR_12
TPR_17
TPR_10
TPR_CcmH_CycH
TPR_6
TPR_7
TPR_11
ARM_TT21_5th
TPR_EMC2
TPR_Slam
ANAPC3
MG280
Motif
Other DBs
NCBI-GeneID:
106537521
NCBI-ProteinID:
XP_013907153
UniProt:
A0A6I9X6Y6
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNT
EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKEN
ASQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKVTEQYPDDVEAWIELA
QILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLD
RAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGA
MARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQN
DTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAH
KGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEV
LLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEV
LNAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEER
ELRAKQEQEKELLRQKLLKEQEEKRLREIEEQKKLLEQRAQYVEKTKNILMFTGEVEGSK
EKKRGSGAGRRSRKTGEFDEFVNDDSDEDLPVSRKKKRRKGSGSEQDGEEEDGEKKKKKR
RRSQKGDGDTDDDENETAPRQKKRRPAKTEKRRMSKPERLPLSMKGKIKSKAIISSSDDS
SDEDKLKIADDGNARNSNSDSDDGEQRPNKNVVSDSDLDNSNKSGSEGGSPRRSSARPSD
EDSDSDGSVRKRRPSDSEQSDNESVQSRRSQSAGSENESRPASRSADSERDSERVSDNEA
SANESEPEASNNEASERGSYHGSDDSD
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctcgattgagatccccctccgggatacagacgaggtcattgagcttgac
ttcgatcagttaccggagggggatgaagttataagcattttgaaacaggaacatactcag
ctgcacatatggattgccctagcgctggaatattacaaacaaggcaaaacggaagacttt
gtgaaactattagaggccgctcgcatagatggaaacctggattatagagaccatgaaaaa
gatcagatgacttgcttagataccttagcagcctactatgtacagcaggctcggaaagaa
aagaacaaagataacaagaaagagcttattacccaagctacactgttgtacactatggct
gataaaattatcatgtatgatcaggcggattctatcaaaaatggtgtccagttactctct
agagcttacacaattgatcctagtaaccctatggtattaaatcacttggcaaatcacttc
ttctttaaaaaggattatggtaaggtccaacatttggcacttcatgcttttcacaataca
gaagtggaagcaatgcaggcagagagttgctaccagctggccaggtcttttcatgttcag
gaagattatgatcaagctttccaatattattaccaagctacacagtttgcctcttcatct
tttgtactgccattttttggactgggtcaaatgtacatttaccgaggagacaaagaaaat
gcctcacagtgctttgaaaaagttttgaaagcctaccctaacaattatgagaccatgaaa
attcttggatctctttacgctgcttcagaagatcaagacaaacgagatattgcaaagggt
catttaaagaaggtgacagaacagtatccagatgatgtagaagcttggattgagctagca
caaatccttgagcagacagatatacagggtgctctttcagcctatggcacagcaacacga
atacttcaagaaaaagtacaagctgatgttcccccagaaattttaaataatgtgggtgct
ctccacttcagacttggaaacttaggagaagcaaagaaatattttttggcatccctggat
agagctaaagcagaagcggaacatgatgaacattactacaatgcaatttcagtgacaaca
tcatacaacttagccagattatatgaagcaatgtgtgaatttcacgaagccgagaaactg
tacaaaaacatcctaagggaacatccaaattatgttgattgctatctgcgtttaggagct
atggctagagataaaggaaacttttatgaagcttctgactggtttaaagaagcacttcaa
atcaatcaggaccatcctgatgcttggtccctgattggcaatcttcacctggccaagcaa
gaatggggtccaggacagaagaaatttgagcgaatattgaaacagccatcaacacagaat
gacacttactctatgttggctttgggcaatgtgtggttgcagactctgcaccaacccaca
agagacagagagaaggaaaaacgtcatcaagatcgtgctctagccatctacaaacaagtc
ctccggaatgatcccaagaatttgtatgctgctaatggcataggagctgtgctggcacac
aaaggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggcaaccgcagat
atcagcgacgtgtggcttaatcttgcacacatttatgtagagcaaaagcagtacatcagt
gctgtgcagatgtatgagaattgcctcagaaaattctataaacatcagaacacagaagta
ttgctatatttggcccgagctcttttcaaatgtggtaaattacaagaatgcaaacaaaca
ttgctaaaggcaagacacgtagcacccagcgatacagtcctgatgttcaatgtggctctt
gtgctgcaaagactagctacctctgtcctgaaagatgaaaaaagtaacttgaaggaagta
ctaaatgctgtgaaagaactggagctagcacacagatacttcagttacttgagtaaagtg
ggagataagatgagatttgatttggcgcttgctgcaaccgaagccaggcagtgttcagat
ctgctgagccaagctcagtatcacgtagctcgggctcgcaagcaggatgaagaagagcgg
gagctgcgagcaaaacaagagcaagaaaaagaactgctgcgtcagaagttgctcaaagaa
caggaagaaaaacgtctcagggaaatagaagaacagaagaaacttttggaacagagagca
caatatgtggagaagaccaagaatattctcatgttcacaggagaagttgaaggctcaaaa
gagaaaaagcgtggtagtggagctggccggcgttccagaaaaactggagaatttgatgaa
tttgtcaatgatgacagtgacgaagatcttccagtatccagaaagaaaaagaggaggaag
ggcagtggcagtgaacaagatggcgaagaagaggatggagagaagaaaaagaagaagcga
cgaagatctcaaaaaggagatggtgatactgatgatgatgaaaacgagacagcacccaga
cagaagaagcgccgcccagccaaaactgagaagagaagaatgtccaaaccagaacgcttg
cctctttcaatgaagggaaaaatcaaatctaaagccatcatttcatcaagcgatgactca
tctgatgaagataaactcaaaattgctgatgatgggaatgccaggaacagcaacagtgac
tcagatgatggcgagcaacgtcctaacaaaaatgttgtgtctgacagcgatttggacaac
agtaacaagtctggcagcgagggaggcagtcccaggagatccagtgcccgcccttcagat
gaagactcagacagcgatggttcagtgagaaagagaagaccgtctgattcggagcaatca
gataatgagtctgtgcagtcaagaagaagtcaatctgctggttctgagaacgaatctcgc
ccagcttcccgcagtgctgattcagagagagattcagagagagtctctgacaacgaggcc
tcggctaatgagtctgagccagaggcttccaacaacgaggcttccgaacgaggttcatat
catggatctgatgatagtgattaa
DBGET
integrated database retrieval system
