Thamnophis sirtalis (common garter snake): 106537645
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Entry
106537645 CDS
T06107
Name
(RefSeq) MHC class II transactivator-like
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tsr01001
]
106537645
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tsr04054
]
106537645
Enzymes [BR:
tsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106537645
Protein kinases [BR:
tsr01001
]
Serine/threonine kinases: Other
TAF1 family
106537645
Pattern recognition receptors [BR:
tsr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106537645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
AAA_16
AAA_22
LRR_14
AAA_25
NB-ARC
SLFN-g3_helicase
nSTAND3
LRR_9
Motif
Other DBs
NCBI-GeneID:
106537645
NCBI-ProteinID:
XP_013907313
UniProt:
A0A6I9X7F5
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MIFTFESAPQPCRPPDAATCPGESSRPSCPPADSKGPQDRQSSTEAEVLRAGCGTPGAPE
GLPPLPLAEPRPSPSAPPPPPGSPRAFCKGLKEHFRRECRSGPGQPLGPLYLERDLVQHH
LDSRGGRSADLRRCHLGEKRKASVERSRLFQTARRKEPGSRVIVVLGKAGTGKSLLVQKV
CLDWAEGLLPQFDFVFRFDCRRLSLLQGTCPDFRSLLSDSLGGSCQGLDDAYASLLRKPE
RVLLLFDGVGDLKDPEGSPSASGSPPCREAPGLGATLGPLFQRELLNGCTLLLTGRPKER
LPQYFPRVDTVLEVVGLSAEQASLCLARSLEGSAHAEQQAKLIRASPYLFSHCGNPGLCR
FICQAALEATAGELPSTLTGLFVTHLLQKAASAAADGRAWRCQGIAALAEVSWCLGQRCQ
RALLSGHFPSAAVKEFALKTGLMEEQRGVCAFSSFAVQDFLLALHLALSQEMKGKKLTQY
LGWGARVRKFLSSGGLVPRFLSGLLFSKDELSGRLLFGKEGDLDAEKTVARKQRSLSRFI
RKLPIRDFSPGKLLELLHCVHETEDPYLLKHVSLELGPDLSFLGFPLPPPDVSVLHSILR
RSSKTFSVDLRGSCLPLEGLRKLVGLKSISKFRVSLGEAVALWKHLWDVREREALQAAME
KFLVGPFRAKTTGDVDALLGLVQLQRDMAEGEDAEGSSARLIPAIAGLLRLEFSLGPSSG
LEGFRKLADSLVAFSALQHLDLDSPDENEIGDKGVGSLARVLPRLASLETLNLSRNKITD
QGAELLAGALPALRSLKTLSLYENNIGDAGAERVAEVLPQMCALRVLDLHCNQISAAGAR
CLTEHLRRCPGIRSLA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcaccttcgaaagtgccccgcagccctgccggcctccggatgcagcaacctgc
ccaggtgagtcttcccgtccgtcctgcccaccggccgactccaagggaccccaagaccgg
cagagcagcaccgaagccgaagtcctgagagcgggatgtgggactccgggagcccctgaa
gggcttcctccgctgcccctggctgagcctcggccctctccctctgctcctcctcctcct
ccaggctcgccccgggctttctgcaaagggctgaaggagcatttccgcagagaatgccgt
tcggggcctgggcagcccctgggacccctgtacctggagagggacttggtgcagcaccac
ctggacagcaggggtgggaggagcgcagacctgaggcggtgccacctgggagagaagcgc
aaggcctccgtggagagaagccgcttgttccagacggccaggagaaaggagccgggcagc
agggtcatcgtggtgctggggaaggccggcacggggaaaagcctgctggtccagaaggtc
tgcctggactgggccgagggcctcctgccccagttcgactttgtcttccggttcgactgc
cggaggctgagcctcctgcagggcacctgccccgacttcaggtccctgctctcggactcc
ctggggggctcctgccagggcctcgatgacgcctacgccagcctcctgcggaagccggaa
agggtcctcctcctgtttgacggcgtgggagacctgaaggaccccgagggctccccctcc
gcttccgggagccccccctgcagggaagcccccggccttggcgccaccttgggccccctc
ttccaacgggagctgctcaacggctgcaccctcctcctgaccgggcggcccaaggagagg
ctcccccagtacttcccacgggtggacaccgtcctggaggtggtgggcctctccgcggag
caggcctcgctctgcctggcccgctctctggagggctctgcccacgcggagcagcaggcg
aagctgatcagggcctccccttacctcttcagccactgtggcaaccccggcctctgccgg
ttcatctgccaggctgcgcttgaggccacggcgggagagctgccctccaccctcaccggc
ctcttcgtcacccacctcctccagaaggcggcaagcgcggcagcagacggcagggcctgg
aggtgccagggcatcgctgccttggccgaggtctcctggtgtctcgggcagaggtgccaa
agggccctcttgagcgggcacttcccttccgcagccgtgaaggagtttgcgctgaaaacg
gggctcatggaggagcagcggggcgtctgcgccttctccagcttcgcggtccaggatttc
ctgctggccctgcacctggctctctcccaagagatgaagggcaagaagctcacccaatac
ctgggctggggggccagggtcaggaaattcctctcctcggggggcctggtgccccgtttc
ctgtctgggctgctcttctccaaggacgagctcagcggccgcctcctcttcggcaaggaa
ggcgacttggatgcggagaagacagtcgccaggaagcagaggagcctctccaggttcatc
cggaaacttcccattcgggatttcagtccagggaaattgctggagctgctccactgtgtc
catgagaccgaagacccctacctcttgaagcacgtgagcctggagctggggccggacctc
tctttcttgggcttcccgctgcccccgccagatgtcagcgtcctgcactccatcctgagg
aggtcctccaagaccttctcggtagacctgaggggcagctgccttcccctggaggggctc
aggaagctggttggcctgaagagcatctccaagttcagggtctccctgggggaagccgtg
gccctctggaagcacctgtgggacgtccgggagagggaagcactgcaggcggccatggag
aagttcctggtggggcccttcagggccaagacgacgggggacgtggatgcccttctcggc
ctggtgcagctgcagagagacatggcggaaggggaagacgctgagggttccagcgcccgc
cttattccagccatcgctgggctcctgcgactggaattcagcctcgggcccagctctggc
ttggagggattccgaaagttggcggattctttggtcgccttctcggctcttcagcacttg
gacttggattcccctgatgagaacgaaatcggagacaaaggggtgggctccctcgcccgc
gtccttcctcgcttggcgtctctggagaccttgaacttgtcccggaacaagatcaccgac
cagggcgctgagctattggccggagccctccccgccctgcgttcgctgaagaccctcagc
ttgtacgaaaacaacattggggacgcgggagcggagcgcgtggcagaggtgctgccccag
atgtgtgcgttgcgggtgctggacctgcactgcaaccagatttctgccgccggagcccgg
tgtctgacggagcacttgaggagatgccccggcatccggagcttggcgtaa
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